RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 MMP23AO75900 390 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 UCHL1P09936 223 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 CGB3P0DN86 165 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 CGB7P0DN87 165 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 GTF2F2P13984 249 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 SERPINA2P20848 420 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 COX7A1P24310 79 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 PAX5Q02548 391 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 GLIPR1L1Q6UWM5 242 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 C12orf54Q6X4T0 127 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 NKAIN3Q8N8D7 197 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 BEND2Q8NDZ0 799 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 MRPS24Q96EL2 167 aaKnown RBP13.68□□□□□ -0.22
HIF3A-211ENST00000528563 YTHDF1Q9BYJ9 559 aaKnown RBP13.68□□□□□ -0.22
HIF3A-211ENST00000528563 DPAGT1Q9H3H5 408 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 TCF7L1Q9HCS4 588 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 ACOT13Q9NPJ3 140 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 MRPS14O60783 128 aaKnown RBP13.67□□□□□ -0.22
HIF3A-211ENST00000528563 PAHP00439 452 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 KCNJ3P48549 501 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 GABARAPL2P60520 117 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 EMX1Q04741 257 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-211ENST00000528563 FOXL1Q12952 345 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 ATXN7L3Q14CW9 347 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-211ENST00000528563 TRAM1Q15629 374 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 TRAPPC6BQ86SZ2 158 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 LINC00596Q86U02 117 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 SUMF2Q8NBJ7 301 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 OR13D1Q8NGV5 346 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 BARHL1Q9BZE3 327 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 SESN1Q9Y6P5 492 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 ODF3BA8MYP8 253 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 HSPB6O14558 160 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 OR7C1O76099 320 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-211ENST00000528563 LGALS4P56470 323 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 RPS25P62851 125 aaKnown RBP13.67□□□□□ -0.22
HIF3A-211ENST00000528563 TAF9Q16594 264 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 MPV17LQ2QL34 196 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 HSD17B12Q53GQ0 312 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 AWAT1Q58HT5 328 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 C1orf100Q5SVJ3 147 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 ZNF626Q68DY1 528 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 HEPN1Q6WQI6 88 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 PLPPR1Q8TBJ4 325 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 DYRK2Q92630 601 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 TAF15Q92804 592 aaKnown RBP eCLIP13.67□□□□□ -0.22
HIF3A-211ENST00000528563 FOXRED1Q96CU9 486 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-211ENST00000528563 DPCDQ9BVM2 203 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-211ENST00000528563 TMEM133Q9H2Q1 129 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 GAL3ST2Q9H3Q3 398 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 ING3Q9NXR8 418 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 OR6C3Q9NZP0 311 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 KIF25Q9UIL4 384 aa13.67□□□□□ -0.22
HIF3A-211ENST00000528563 CLPXO76031 633 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 PSMA1P25786 263 aaKnown RBP13.66□□□□□ -0.22
HIF3A-211ENST00000528563 C17orf58Q2M2W7 97 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 LDLRAD2Q5SZI1 272 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 RSBN1Q5VWQ0 802 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-211ENST00000528563 AWAT2Q6E213 333 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 ZNF367Q7RTV3 350 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 LHFPL4Q7Z7J7 247 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 ZNF565Q8N9K5 539 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 TMEM104Q8NE00 496 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 LINC00574Q9H8X3 128 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 GHRLQ9UBU3 117 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 LRRC42Q9Y546 428 aa13.66□□□□□ -0.22
HIF3A-211ENST00000528563 MEIKINA0A087WXM9 373 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 ZNF729A6NN14 1252 aaPredicted RBP13.65□□□□□ -0.22
HIF3A-211ENST00000528563 GPR137BO60478 399 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 ARG1P05089 322 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 CDK2P24941 298 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 RPL15P61313 204 aaKnown RBP13.65□□□□□ -0.22
HIF3A-211ENST00000528563 FABP5Q01469 135 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 SSX1Q16384 188 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 AANATQ16613 207 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 GLT8D1Q68CQ7 371 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 OR52W1Q6IF63 320 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 SSX3Q99909 188 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 BANF2Q9H503 90 aa13.65□□□□□ -0.22
HIF3A-211ENST00000528563 TBL2Q9Y4P3 447 aaKnown RBP13.65□□□□□ -0.22
HIF3A-211ENST00000528563 IGHV2-26A0A0B4J1V2 119 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 KBTBD11-OT1A0A1B0GTJ5 212 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 MGMTP16455 207 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 PAX6P26367 422 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 CFPP27918 469 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 GABRA5P31644 462 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 GDNFP39905 211 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 RELBQ01201 579 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 PRAMEF5Q5TYX0 476 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 SLC35E4Q6ICL7 350 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 BRICD5Q6PL45 260 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 BAIAP2L2Q6UXY1 529 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 SPARTQ8N0X7 666 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 DYNAPQ8N1N2 210 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 OR13A1Q8NGR1 328 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 OR5R1Q8NH85 324 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 MALSU1Q96EH3 234 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 CLEC7AQ9BXN2 247 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 C1RLQ9NZP8 487 aa13.64□□□□□ -0.23
HIF3A-211ENST00000528563 VPREB3Q9UKI3 123 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms