RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 ZNF19P17023 458 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 DUTP33316 252 aaKnown RBP3.15□□□□□ -1.9
PTPN22-207ENST00000528414 MAGEA5P43359 124 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 HILS1P60008 231 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 CDK3Q00526 305 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 TRIP6Q15654 476 aaKnown RBP3.15□□□□□ -1.9
PTPN22-207ENST00000528414 C6orf141Q5SZD1 244 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 GFI1BQ5VTD9 330 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 Q6ZVH6 145 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 LRRTM1Q86UE6 522 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 C17orf82Q86X59 251 aaPredicted RBP3.15□□□□□ -1.9
PTPN22-207ENST00000528414 LINC01561Q8N1V8 128 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 TCTEX1D1Q8N7M0 179 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 ZNF485Q8NCK3 441 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 OR8G5Q8NG78 346 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 RNF141Q8WVD5 230 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 DCUN1D4Q92564 292 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 TBX15Q96SF7 602 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 MEIS3Q99687 375 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 RNASE7Q9H1E1 156 aaKnown RBP3.15□□□□□ -1.9
PTPN22-207ENST00000528414 MANSC1Q9H8J5 431 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 RNF121Q9H920 327 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 SMCO4Q9NRQ5 59 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 NAT8Q9UHE5 227 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 NAT8BQ9UHF3 227 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 BTRCQ9Y297 605 aa3.15□□□□□ -1.9
PTPN22-207ENST00000528414 SF3B6Q9Y3B4 125 aaKnown RBP3.15□□□□□ -1.9
PTPN22-207ENST00000528414 LOC107984640A0A0U1RRK4 108 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 BTNL10A8MVZ5 291 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 MFNGO00587 321 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 MYL12BO14950 172 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 SPRY3O43610 288 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 FAM189A1O60320 539 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 KBTBD11O94819 623 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 CLIC3O95833 236 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 CHRNB2P17787 502 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 MYL12AP19105 171 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 PYCR1P32322 319 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 LEPP41159 167 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 PGFP49763 221 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 ZNF83P51522 516 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 TIMM10P62072 90 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 FZD2Q14332 565 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 SNRNP35Q16560 246 aaKnown RBP3.15□□□□□ -1.91
PTPN22-207ENST00000528414 CD300EQ496F6 205 aaPredicted RBP3.15□□□□□ -1.91
PTPN22-207ENST00000528414 TMEM236Q5W0B7 351 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 EPGNQ6UW88 154 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 IGFL2Q6UWQ7 119 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 IL34Q6ZMJ4 242 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 ZNF788Q6ZQV5 615 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 GKN2Q86XP6 184 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 PLXDC1Q8IUK5 500 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 GPR135Q8IZ08 494 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 SLC22A18ASQ8N1D0 253 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 BEST3Q8N1M1 668 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 CFAP52Q8N1V2 620 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 TMEM178AQ8NBL3 297 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 OR5M3Q8NGP4 307 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 OR1B1Q8NGR6 318 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 OR13C6PQ8NH95 151 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 AGPAT1Q99943 283 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 C20orf27Q9GZN8 174 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 TMEM126AQ9H061 195 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 SLC25A19Q9HC21 320 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 EXOSC3Q9NQT5 275 aaKnown RBP3.15□□□□□ -1.91
PTPN22-207ENST00000528414 RLIMQ9NVW2 624 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 DHDHQ9UQ10 334 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 LSM4Q9Y4Z0 139 aaKnown RBP3.15□□□□□ -1.91
PTPN22-207ENST00000528414 SHISA3A0PJX4 238 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 FAM231BA6NCW3 169 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 GAGE12HA6NDE8 117 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 ZNF705EA8MWA4 302 aaPredicted RBP3.15□□□□□ -1.91
PTPN22-207ENST00000528414 ZNF195O14628 629 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 SYNGR1O43759 233 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 DIRAS1O95057 198 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 FAM157BP0CG42 384 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 LAMP1P11279 417 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 PGAM2P15259 253 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 FASP25445 335 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 ACRV1P26436 265 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 BLVRBP30043 206 aaPredicted RBP3.15□□□□□ -1.91
PTPN22-207ENST00000528414 OPRD1P41143 372 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 RPL31P62899 125 aaKnown RBP3.15□□□□□ -1.91
PTPN22-207ENST00000528414 FABP5Q01469 135 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 HSD52Q0P140 79 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 MFAP5Q13361 173 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 SIX1Q15475 284 aaPredicted RBP3.15□□□□□ -1.91
PTPN22-207ENST00000528414 RGNQ15493 299 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 TMEM244Q5VVB8 128 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 AGTRAPQ6RW13 159 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 SHC4Q6S5L8 630 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 ZFP41Q8N8Y5 198 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 ACVR1CQ8NER5 493 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 OR11G2Q8NGC1 345 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 HMGCLL1Q8TB92 370 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 RASL10AQ92737 203 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 CLCC1Q96S66 551 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 OR8D2Q9GZM6 311 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 TMEM133Q9H2Q1 129 aa3.15□□□□□ -1.91
PTPN22-207ENST00000528414 POMT2Q9UKY4 750 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms