RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 RMND5BQ96G75 393 aaPredicted RBP4.2□□□□□ -1.74
PCF11-202ENST00000528336 RILPQ96NA2 401 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 NUDT9Q9BW91 350 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 YTHDF1Q9BYJ9 559 aaKnown RBP4.2□□□□□ -1.74
PCF11-202ENST00000528336 PCBD2Q9H0N5 130 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 ZNF442Q9H7R0 627 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 MARCH5Q9NX47 278 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 CMTM6Q9NX76 183 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 FBXO5Q9UKT4 447 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 SLC7A11Q9UPY5 501 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 OR51B4Q9Y5P0 310 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 PTPRJQ12913 1337 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 TRANK1O15050 2925 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 CDH23Q9H251 3354 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 PTPRSQ13332 1948 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 IGHV1OR21-1A0A087WYE8 117 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 A0A1B0GV72 72 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 EPOPA6NHQ4 379 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 F5H5K5 113 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 TNFRSF11BO00300 401 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 PIRO00625 290 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 STX10O60499 249 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 ENTPD6O75354 484 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 OR2B3O76000 313 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 DUSP14O95147 198 aaKnown RBP4.19□□□□□ -1.74
PCF11-202ENST00000528336 SLC2A10O95528 541 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 HAND1O96004 215 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 AK4P27144 223 aaPredicted RBP4.19□□□□□ -1.74
PCF11-202ENST00000528336 IFNGR2P38484 337 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 CRYBA4P53673 196 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 BIDP55957 195 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 PUDPQ08623 228 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 TGIF1Q15583 401 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 MAPK14Q16539 360 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 HLA-DRB5Q30154 266 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 TEX30Q5JUR7 227 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 TRIQKQ629K1 86 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 ZNF544Q6NX49 715 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 C2orf66Q6UXQ4 117 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 SLC36A1Q7Z2H8 476 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 FTMTQ8N4E7 242 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 ZNF525Q8N782 197 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 GATD1Q8NB37 220 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 OR52E4Q8NGH9 312 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 STOML3Q8TAV4 291 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 ZFAND1Q8TCF1 268 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 SLC25A38Q96DW6 304 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 PIK3IP1Q96FE7 263 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 ZIM3Q96PE6 472 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 DHRS9Q9BPW9 319 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 SLC19A3Q9BZV2 496 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 MAP1LC3AQ9H492 121 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 ENOPH1Q9UHY7 261 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 CELA1Q9UNI1 258 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 KIF25-AS1Q9Y6Z4 181 aa4.19□□□□□ -1.74
PCF11-202ENST00000528336 SZT2Q5T011 3432 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 IGHV3-35A0A0C4DH35 117 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 CEACAM18A8MTB9 384 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 HCRTR1O43613 425 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 TTC4O95801 387 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 SEMG1P04279 462 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 KLK3P07288 261 aaPredicted RBP4.18□□□□□ -1.74
PCF11-202ENST00000528336 H2AFZP0C0S5 128 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 PGA4P0DJD7 388 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 PGA3P0DJD8 388 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 PGA5P0DJD9 388 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 GTF2F2P13984 249 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 ZBTB25P24278 435 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 GRPRP30550 384 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 SHMT2P34897 504 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 P2RY4P51582 365 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 FGF8P55075 233 aaPredicted RBP4.18□□□□□ -1.74
PCF11-202ENST00000528336 MYL5Q02045 173 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 HIST3H3Q16695 136 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 CCDC153Q494R4 210 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 RSBN1Q5VWQ0 802 aaPredicted RBP4.18□□□□□ -1.74
PCF11-202ENST00000528336 SKA3Q8IX90 412 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 NRMQ8IXM6 262 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 RDH10Q8IZV5 341 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 GAPTQ8N292 157 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 ZADH2Q8N4Q0 377 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 DEFB123Q8N688 67 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 OR4C13Q8NGP0 309 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 OR51Q1Q8NH59 317 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 RERGQ96A58 199 aaPredicted RBP4.18□□□□□ -1.74
PCF11-202ENST00000528336 DDIT4LQ96D03 193 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 IMP4Q96G21 291 aaKnown RBP4.18□□□□□ -1.74
PCF11-202ENST00000528336 MRAP2Q96G30 205 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 ANKRD36BP1Q96IX9 119 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 CDX2Q99626 313 aaPredicted RBP4.18□□□□□ -1.74
PCF11-202ENST00000528336 PAXXQ9BUH6 204 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 ACTR6Q9GZN1 396 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 NMUR2Q9GZQ4 415 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 MYOZ1Q9NP98 299 aaPredicted RBP4.18□□□□□ -1.74
PCF11-202ENST00000528336 DDIT4Q9NX09 232 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 NDRG2Q9UN36 371 aaKnown RBP4.18□□□□□ -1.74
PCF11-202ENST00000528336 NDUFAF1Q9Y375 327 aa4.18□□□□□ -1.74
PCF11-202ENST00000528336 A0A0G2JLM5 398 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 FAM240AA0A1B0GVK7 77 aa4.17□□□□□ -1.74
PCF11-202ENST00000528336 CLDN24A6NM45 220 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms