RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 MAPK3P27361 379 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 HSPA13P48723 471 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 DYNLT3P51808 116 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 SLC35A2P78381 396 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 GPR50Q13585 617 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 DOC2BQ14184 412 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 PAN3Q58A45 887 aaKnown RBP9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 UNQ9370/PRO34162Q6UXP9 181 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 Q6ZSV7 163 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 LHFPL4Q7Z7J7 247 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 OSR2Q8N2R0 312 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 MS4A15Q8N5U1 240 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 DTX3Q8N9I9 347 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 ZNF565Q8N9K5 539 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 PIFOQ8TCI5 191 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 ORAI1Q96D31 301 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 OR14A2Q96R54 314 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 CLEC7AQ9BXN2 247 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 ANKRD60Q9BZ19 345 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 DUSP21Q9H596 190 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 RAB18Q9NP72 206 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 ST3GAL6Q9Y274 331 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 RNF114Q9Y508 228 aa9.81□□□□□ -0.84
TRAPPC4-209ENST00000528230 FBN3Q75N90 2809 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 A0A087X0M5 115 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 PNMA8CA0A1B0GUJ8 204 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 A0A1B0GX30 115 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 MEGF11A6BM72 1044 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 PIN1P1O15428 100 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 MMP23AO75900 390 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 GTF2F2P13984 249 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 CDK2P24941 298 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 CD34P28906 385 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 RBM11P57052 281 aaKnown RBP9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 DYNC1I2Q13409 638 aaKnown RBP9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 IRF3Q14653 427 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 SPHARQ15513 63 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 MPV17LQ2QL34 196 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 PIGYQ3MUY2 71 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 ABHD12Q8N2K0 398 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 NKAIN3Q8N8D7 197 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 OR4D6Q8NGJ1 314 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 OR10K1Q8NGX5 313 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 ZNF596Q8TC21 504 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 WFDC12Q8WWY7 111 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 MRPS24Q96EL2 167 aaKnown RBP9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 LINC00574Q9H8X3 128 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 FBLN5Q9UBX5 448 aa9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 LSM2Q9Y333 95 aaKnown RBP9.8□□□□□ -0.84
TRAPPC4-209ENST00000528230 KBTBD11-OT1A0A1B0GTJ5 212 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 A0A1W2PPK0 400 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 HTR1DP28221 377 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 KIR2DS4P43632 304 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 PROK1P58294 105 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 ATXN7L3Q14CW9 347 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 SSX2Q16385 188 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 C17orf58Q2M2W7 97 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 LDLRAD2Q5SZI1 272 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 RSBN1Q5VWQ0 802 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 SLC35E4Q6ICL7 350 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 LYPD6Q86Y78 171 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 DYNAPQ8N1N2 210 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 SUMF2Q8NBJ7 301 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 CREB3L1Q96BA8 519 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 UQCC2Q9BRT2 126 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 PPIL3Q9H2H8 161 aaKnown RBP9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 RANBP3Q9H6Z4 567 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 ISYNA1Q9NPH2 558 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 ABCB10Q9NRK6 738 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 PITPNC1Q9UKF7 332 aa9.79□□□□□ -0.84
TRAPPC4-209ENST00000528230 MEIKINA0A087WXM9 373 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 MAGEA13PA6NCF6 341 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 RGS10O43665 173 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 OR7C1O76099 320 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 IGLV1-47P01700 117 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 MAS1P04201 325 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 SERPINA2P20848 420 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 PAX6P26367 422 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 PRRX1P54821 245 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 MED22Q15528 200 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 FAM189A2Q15884 450 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 LY6EQ16553 131 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 SLC22A6Q4U2R8 563 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 ACSM3Q53FZ2 586 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 PRAMEF5Q5TYX0 476 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 C11orf88Q6PI97 169 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 GLIPR1L1Q6UWM5 242 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 SLC16A12Q6ZSM3 486 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 JAGN1Q8N5M9 183 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 OR10A7Q8NGE5 316 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 OR4P4Q8NGL7 312 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 PHYHIPQ92561 330 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 MUL1Q969V5 352 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 OR5M11Q96RB7 305 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 NKX3-1Q99801 234 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 CITED1Q99966 193 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 DPCDQ9BVM2 203 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 SPACA1Q9HBV2 294 aa9.78□□□□□ -0.84
TRAPPC4-209ENST00000528230 ING3Q9NXR8 418 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms