RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 C10orf35Q96D05 121 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 BOD1Q96IK1 185 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 ANGPTL4Q9BY76 406 aa10.82□□□□□ -0.68
CAPN1-208ENST00000527323 PTRH2Q9Y3E5 179 aaKnown RBP10.82□□□□□ -0.68
CAPN1-208ENST00000527323 H0YL77 283 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 TP53I11O14683 189 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 NRASP01111 189 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 PATE4P0C8F1 98 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 HOXA5P20719 270 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 KMT5CQ86Y97 462 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 PRSS33Q8NF86 280 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF407Q9C0G0 2248 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 IGLV3-32A0A0A0MS00 114 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 C3orf85A0A1B0GTC6 90 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 IGSF23A1L1A6 192 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF724A8MTY0 619 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 PPIHO43447 177 aaKnown RBP10.81□□□□□ -0.68
CAPN1-208ENST00000527323 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-208ENST00000527323 OR7C1O76099 320 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-208ENST00000527323 JMJD7P0C870 316 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 OTX2P32243 289 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 HTR5AP47898 357 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 ATP1A1-AS1Q5TC04 95 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF774Q6NX45 483 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF429Q86V71 674 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 AGBL5Q8NDL9 886 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 NABP1Q96AH0 204 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 MUCL1Q96DR8 90 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 GAR1Q9NY12 217 aaKnown RBP10.81□□□□□ -0.68
CAPN1-208ENST00000527323 FOXJ2Q9P0K8 574 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 DOK5Q9P104 306 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 DOCK7Q96N67 2140 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 LOC102725191A0A1B0GVB3 256 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 MPPED1O15442 326 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 DLK1P80370 383 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 PDZD11Q5EBL8 140 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 AKR1C8PQ5T2L2 129 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 OR4D5Q8NGN0 318 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 OR5C1Q8NGR4 320 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 PIGCQ92535 297 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 MOB3AQ96BX8 217 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 SLC25A31Q9H0C2 315 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 PLEKHF2Q9H8W4 249 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 LOXL2Q9Y4K0 774 aa10.81□□□□□ -0.68
CAPN1-208ENST00000527323 IGLV3-12A0A075B6K2 115 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 VSTM5A8MXK1 200 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 SPINK2P20155 84 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 CDX1P47902 265 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-208ENST00000527323 C10orf128Q5T292 105 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 TIPARPQ7Z3E1 657 aaKnown RBP10.8□□□□□ -0.68
CAPN1-208ENST00000527323 C1QL4Q86Z23 238 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 RNF138Q8WVD3 245 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 GPHA2Q96T91 129 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 LRFN3Q9BTN0 628 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 TMEM9BQ9NQ34 198 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 P4HTMQ9NXG6 502 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 DOCK10Q96BY6 2186 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 IGKV1-12A0A0C4DH73 117 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 PPYP01298 95 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 IGKV1D-12P01611 117 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 TCN2P20062 427 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 FKBP2P26885 142 aaKnown RBP10.8□□□□□ -0.68
CAPN1-208ENST00000527323 GNRHRP30968 328 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 OTX1P32242 354 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-208ENST00000527323 HIKESHIQ53FT3 197 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 CXorf66Q5JRM2 361 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-208ENST00000527323 SLC25A24Q6NUK1 477 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF610Q8N9Z0 462 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 CCDC54Q8NEL0 328 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 TMEM54Q969K7 222 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 SMDT1Q9H4I9 107 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 DMRT1Q9Y5R6 373 aa10.8□□□□□ -0.68
CAPN1-208ENST00000527323 TRDCB7Z8K6 153 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 LY86O95711 162 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 RUNX1Q01196 453 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 HES3Q5TGS1 186 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 LHFPL2Q6ZUX7 228 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 TMEM252Q8N6L7 170 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 CYB561D1Q8N8Q1 229 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF383Q8NA42 475 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 OR10D4PQ8NGN7 298 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 NIPSNAP3BQ9BS92 247 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 WSB1Q9Y6I7 421 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 A0A1B0GW64 132 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 ATXN7O15265 892 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-208ENST00000527323 CYB5BO43169 146 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 GATCO43716 136 aaKnown RBP10.79□□□□□ -0.68
CAPN1-208ENST00000527323 PDCD6O75340 191 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 SRP19P09132 144 aaKnown RBP10.79□□□□□ -0.68
CAPN1-208ENST00000527323 CXCL1P09341 107 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 DYNLT3P51808 116 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 RPL23AP62750 156 aaKnown RBP10.79□□□□□ -0.68
CAPN1-208ENST00000527323 PYY3Q5JQD4 70 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 PLCXD3Q63HM9 321 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 SPSB3Q6PJ21 355 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 DPPA2Q7Z7J5 298 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 Q8WTZ3 238 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 SPIN2AQ99865 258 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 SPIN2BQ9BPZ2 258 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms