RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 SLC25A28Q96A46 364 aa13.23□□□□□ -0.29
SSSCA1-202ENST00000526433 MRPS24Q96EL2 167 aaKnown RBP13.23□□□□□ -0.29
SSSCA1-202ENST00000526433 BARHL1Q9BZE3 327 aa13.23□□□□□ -0.29
SSSCA1-202ENST00000526433 IFT22Q9H7X7 185 aa13.23□□□□□ -0.29
SSSCA1-202ENST00000526433 ZMAT3Q9HA38 289 aaKnown RBP13.23□□□□□ -0.29
SSSCA1-202ENST00000526433 TNFRSF19Q9NS68 423 aa13.23□□□□□ -0.29
SSSCA1-202ENST00000526433 TRGV10A0A0A0MS01 117 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 ODAMA1E959 279 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 ARL6IP5O75915 188 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 RNASE1P07998 156 aaKnown RBP13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 GABRA5P31644 462 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 SAA4P35542 130 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 MPV17LQ2QL34 196 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 MIDNQ504T8 468 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 C1orf100Q5SVJ3 147 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 ATAD3CQ5T2N8 411 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 UBE2UQ5VVX9 321 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 LINC00596Q86U02 117 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 DPCDQ9BVM2 203 aaPredicted RBP13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 BANF2Q9H503 90 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 TAS2R3Q9NYW6 316 aa13.22□□□□□ -0.29
SSSCA1-202ENST00000526433 CRTAPO75718 401 aaPredicted RBP13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 FBP1P09467 338 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 KCNJ3P48549 501 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 C16orf87Q6PH81 154 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 ZNF773Q6PK81 442 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 BRICD5Q6PL45 260 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 LDLRAD3Q86YD5 345 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 TMEM86BQ8N661 226 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 TMEM104Q8NE00 496 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 OR13D1Q8NGV5 346 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 PLPPR1Q8TBJ4 325 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 SELENOIQ9C0D9 397 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 NCOR1P1Q9H4R4 102 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 GHRLQ9UBU3 117 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 KIF25Q9UIL4 384 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 AK6Q9Y3D8 172 aaKnown RBP13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 SESN1Q9Y6P5 492 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 DNHD1Q96M86 4753 aa13.21□□□□□ -0.29
SSSCA1-202ENST00000526433 MMP23AO75900 390 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 PAHP00439 452 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 MGMTP16455 207 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 CALRP27797 417 aaKnown RBP13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 IER3P46695 156 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 LGALS4P56470 323 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 ACTG1P63261 375 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 RSBN1Q5VWQ0 802 aaPredicted RBP13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 ZNF565Q8N9K5 539 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 C17orf50Q8WW18 174 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 SSMEM1Q8WWF3 244 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 GCDHQ92947 438 aaPredicted RBP13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 AJUBAQ96IF1 538 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 GAL3ST2Q9H3Q3 398 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 NDUFB11Q9NX14 153 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 OR6C3Q9NZP0 311 aa13.2□□□□□ -0.3
SSSCA1-202ENST00000526433 MEIKINA0A087WXM9 373 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 TRDV1A0A1B0GX56 115 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 TMEM89A2RUT3 159 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 ZNF729A6NN14 1252 aaPredicted RBP13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 CCRL2O00421 344 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 CLPXO76031 633 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 IGHV4-59P01825 116 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 UBBP0CG47 229 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 CGB3P0DN86 165 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 CGB7P0DN87 165 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 CDK2P24941 298 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 PSMB9P28065 219 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 HTR2CP28335 458 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 PAX5Q02548 391 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 PRAMEF5Q5TYX0 476 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 HEPN1Q6WQI6 88 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 OR11H6Q8NGC7 330 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 FCGR1BQ92637 280 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 GFI1Q99684 422 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 CHIAQ9BZP6 476 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 CST11Q9H112 138 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 TMEM133Q9H2Q1 129 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 DPAGT1Q9H3H5 408 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 ZNRD1Q9P1U0 126 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 POMT1Q9Y6A1 747 aa13.19□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A10PA6NDY2 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A18PA6NE21 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A16PA6NEW6 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A20PA6NIJ5 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A8PA6NJQ4 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A7PA6NKC0 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A22PA8MWA6 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A12PA8MX19 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A5PA8MXJ8 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A23PA8MXZ1 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 MCRIP1C9JLW8 97 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 SLC22A1O15245 554 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 MPIG6BO95866 241 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 ARG1P05089 322 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A15PP0C7V4 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A13PP0C7W8 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A14PP0C7W9 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM90A24PP0C7X0 464 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 C17orf58Q2M2W7 97 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms