RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 FAM181BA6NEQ2 426 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 SLC17A2O00624 439 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 MGST3O14880 152 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 CRTAPO75718 401 aaPredicted RBP8.32□□□□□ -1.08
VPS28-204ENST00000526054 GABARAPO95166 117 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 CRYBA1P05813 215 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 GADD45AP24522 165 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 LMO1P25800 156 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 RAG2P55895 527 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 EDDM3BP56851 147 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 RBM11P57052 281 aaKnown RBP8.32□□□□□ -1.08
VPS28-204ENST00000526054 BPIFB3P59826 476 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 RPL31P62899 125 aaKnown RBP8.32□□□□□ -1.08
VPS28-204ENST00000526054 DEFA6Q01524 100 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 EDDM3AQ14507 147 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 RAB11BQ15907 218 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 MPV17LQ2QL34 196 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 PIGYQ3MUY2 71 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 PDLIM3Q53GG5 364 aaPredicted RBP8.32□□□□□ -1.08
VPS28-204ENST00000526054 PAN3Q58A45 887 aaKnown RBP8.32□□□□□ -1.08
VPS28-204ENST00000526054 RUSC1-AS1Q66K80 236 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 Q6P435 159 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 C17orf107Q6ZR85 190 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 LY6G5BQ8NDX9 201 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 OR4F5Q8NH21 305 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 WFDC12Q8WWY7 111 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 ISOC1Q96CN7 298 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 CHCHD6Q9BRQ6 235 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 CHST6Q9GZX3 395 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 TXNL4BQ9NX01 149 aaKnown RBP8.32□□□□□ -1.08
VPS28-204ENST00000526054 ONECUT1Q9UBC0 465 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 MMP24Q9Y5R2 645 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 KPTNQ9Y664 436 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 V9GY05 133 aa8.32□□□□□ -1.08
VPS28-204ENST00000526054 WNK1Q9H4A3 2382 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 LOC100506127A0A0U1RQW1 187 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 A0A1W2PP11 408 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A10PA6NDY2 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A18PA6NE21 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A16PA6NEW6 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A20PA6NIJ5 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A8PA6NJQ4 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A7PA6NKC0 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A22PA8MWA6 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A12PA8MX19 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A5PA8MXJ8 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A23PA8MXZ1 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 H3BUI4 141 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 M0R1W7 72 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 SLC33A1O00400 549 aaPredicted RBP8.31□□□□□ -1.08
VPS28-204ENST00000526054 SLC22A1O15245 554 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 AIREO43918 545 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 PSPNO60542 156 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 OR7C1O76099 320 aaPredicted RBP8.31□□□□□ -1.08
VPS28-204ENST00000526054 TOX4O94842 621 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 BPNT1O95861 308 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 CSN2P05814 226 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A15PP0C7V4 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A13PP0C7W8 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A14PP0C7W9 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FAM90A24PP0C7X0 464 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 CD37P11049 281 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 MGMTP16455 207 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 RAB3BP20337 219 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 OR3A1P47881 315 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 KCNJ3P48549 501 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 ARF6P62330 175 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 MIDNQ504T8 468 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 FOXB2Q5VYV0 432 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 GDPGP1Q6ZNW5 385 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 SLC16A12Q6ZSM3 486 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 OR4S1Q8NGB4 309 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 OR4M1Q8NGD0 313 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 KCTD7Q96MP8 289 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 WDFY2Q96P53 400 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 GFI1Q99684 422 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 CHIAQ9BZP6 476 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 SIRPDQ9H106 197 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 OR51E2Q9H255 320 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 PPA2Q9H2U2 334 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 PRDM13Q9H4Q3 707 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 IFT22Q9H7X7 185 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 BEX1Q9HBH7 125 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 SPACA1Q9HBV2 294 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 C19orf12Q9NSK7 152 aa8.31□□□□□ -1.08
VPS28-204ENST00000526054 TRAV24A0A0B4J272 114 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 A0A0G2JK05 382 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 hCG_1809904A0A1W2PP81 198 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 A0A1W2PPE2 198 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 A0A1W2PR64 198 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 A0A1W2PRV1 198 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 hADV38S2A0JD32 116 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 H3BMQ9 156 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 HSPB6O14558 160 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 GEMIN2O14893 280 aaKnown RBP8.3□□□□□ -1.08
VPS28-204ENST00000526054 MPIG6BO95866 241 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 MELTFP08582 738 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 ARSBP15848 533 aa8.3□□□□□ -1.08
VPS28-204ENST00000526054 ERP29P30040 261 aaKnown RBP8.3□□□□□ -1.08
VPS28-204ENST00000526054 P2RX3P56373 397 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms