RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TMEM200BQ69YZ2 307 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 IL17RELQ6ZVW7 336 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 USP43Q70EL4 1123 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 BTN2A1Q7KYR7 527 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 Q8N7P7 452 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 ASCC1Q8N9N2 400 aaKnown RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 PNLDC1Q8NA58 520 aaKnown RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 TMEM185AQ8NFB2 350 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 OR8B3Q8NGG8 313 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 RAB2BQ8WUD1 216 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 RBMXL1Q96E39 390 aaKnown RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 TIMD4Q96H15 378 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 ARHGAP5-AS1Q96IT6 56 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 SNX22Q96L94 193 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 OR8B2Q96RD0 313 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 SSBP3Q9BWW4 388 aaPredicted RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 TMEM59Q9BXS4 323 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 PECRQ9BY49 303 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 ZNRD1Q9P1U0 126 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 RCC2Q9P258 522 aaKnown RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 COMMD3Q9UBI1 195 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 SLC25A10Q9UBX3 287 aaPredicted RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 MIOXQ9UGB7 285 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 RSL24D1Q9UHA3 163 aaKnown RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 OPN4Q9UHM6 478 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 EDARQ9UNE0 448 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 PEX16Q9Y5Y5 336 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 WNK2Q9Y3S1 2297 aa5.34□□□□□ -1.56
CD44-214ENST00000525211 DOCK11Q5JSL3 2073 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.33□□□□□ -1.56
CD44-214ENST00000525211 LOC105371242A0A075B767 164 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 IGHV3OR16-10A0A075B7F0 116 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 IGKV1D-8A0A087WSZ0 117 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 A8MXK9 166 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 SH2D1BO14796 132 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 SSX5O60225 188 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 CYB5AP00167 134 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 CSTBP04080 98 aaKnown RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 FCER2P06734 321 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 CGB3P0DN86 165 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 CGB7P0DN87 165 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 GNB3P16520 340 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 NDUFB7P17568 137 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 CDK2P24941 298 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 PAX6P26367 422 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 BLVRBP30043 206 aaPredicted RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 CAPZA1P52907 286 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 GNB2P62879 340 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 IL13RA1P78552 427 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 KLRD1Q13241 179 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 GRK1Q15835 563 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 ZNF260Q3ZCT1 412 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 KLF17Q5JT82 389 aaPredicted RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 NKAPLQ5M9Q1 402 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 ATAD3CQ5T2N8 411 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 METTL11BQ5VVY1 283 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 RAB12Q6IQ22 244 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 HCP5Q6MZN7 132 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 OR2W3Q7Z3T1 314 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 PEG10Q86TG7 708 aaKnown RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 LAX1Q8IWV1 398 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 Q8IYB0 196 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 OR8H2Q8N162 312 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 MUC20Q8N307 709 aaPredicted RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 PNKDQ8N490 385 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 ZNF561Q8N587 486 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 SPICQ8N5J4 248 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 LY6G5BQ8NDX9 201 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 OR13A1Q8NGR1 328 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 OR4K15Q8NH41 348 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 KCNG3Q8TAE7 436 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 CCDC107Q8WV48 283 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 MAFIPQ8WZ33 124 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 H1FXQ92522 213 aaKnown RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 DPCDQ9BVM2 203 aaPredicted RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 SSBP4Q9BWG4 385 aaPredicted RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 NXF2Q9GZY0 626 aaKnown RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 ATG5Q9H1Y0 275 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 IFT22Q9H7X7 185 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 SEBOXQ9HB31 216 aaPredicted RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 RHBDL2Q9NX52 303 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 AK3Q9UIJ7 227 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 KIF25Q9UIL4 384 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 RAB22AQ9UL26 194 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 SPATA2Q9UM82 520 aa5.33□□□□□ -1.56
CD44-214ENST00000525211 FN1P02751 2386 aaKnown RBP5.33□□□□□ -1.56
CD44-214ENST00000525211 DSCAML1Q8TD84 2053 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 FBN3Q75N90 2809 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 A0A075B6Q4 140 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 IGHV2-70DA0A0C4DH43 119 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 SMIM31A0A1B0GVY4 71 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 MEIS3P1A6NDR6 274 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 NKX6-3A6NJ46 265 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 MFNGO00587 321 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 NDUFB3O43676 98 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 PDCD6O75340 191 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 TGFAP01135 160 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 HLA-DQB1P01920 261 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 MT-ND4P03905 459 aa5.32□□□□□ -1.56
CD44-214ENST00000525211 MSMBP08118 114 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms