RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 LINC00574Q9H8X3 128 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 RNF121Q9H920 327 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 SP140LQ9H930 580 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 VIPAS39Q9H9C1 493 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 RHOFQ9HBH0 211 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 CCNB1IP1Q9NPC3 277 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 ISYNA1Q9NPH2 558 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 TMEM100Q9NV29 134 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 C1orf109Q9NX04 203 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 RNF14Q9UBS8 474 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 KLK11Q9UBX7 282 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 ZNF225Q9UK10 706 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 ZNF222Q9UK12 451 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 KLHDC2Q9Y2U9 406 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 RNF11Q9Y3C5 154 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 GMPPBQ9Y5P6 360 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 PUS1Q9Y606 427 aaKnown RBP eCLIP1.07□□□□□ -2.24
CD44-212ENST00000524922 NUP214P35658 2090 aaPredicted RBP1.07□□□□□ -2.24
CD44-212ENST00000524922 TNXBP22105 4242 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 IGKV1D-42A0A075B6H8 117 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TRAV24A0A0B4J272 114 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TRAV25A0A0B4J276 109 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 A0A0U1RQV1 116 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TEX48A0A1B0GUV7 120 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 hCG_38984A0A1B0GV85 526 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TCRBV9S1A1TA0A576 114 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TMEM120BA0PK00 339 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 C5orf49A4QMS7 147 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 NCF1BA6NI72 391 aaPredicted RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 DHRS7CA6NNS2 312 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 NCF1CA8MVU1 366 aaPredicted RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 LEUTXA8MZ59 168 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SUPT3HB4E1H0 165 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 C12orf77C9JDV5 145 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 K7EP13 123 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 M0R3G1 203 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 UBXN8O00124 270 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 HMGN4O00479 90 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 IMPA2O14732 288 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 OVOL1O14753 267 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 MLNRO43193 412 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ADAM20O43506 726 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TNFSF12O43508 249 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 CHP2O43745 196 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SNX3O60493 162 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 FCMRO60667 390 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TPST2O60704 377 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SCN2BO60939 215 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 E2F6O75461 281 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SUPT3HO75486 399 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 OR2A4O95047 310 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 AKR7A3O95154 331 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 CNIH1O95406 144 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 IGLV1-47P01700 117 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 KRT14P02533 472 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 APOC1P02654 83 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 FGGP02679 453 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 BGLAPP02818 100 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 CSN2P05814 226 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 C2P06681 752 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SNRPAP09012 282 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 LGALS1P09382 135 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 INAFM2P0DMQ5 153 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 UMPSP11172 480 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 NCF1P14598 390 aaPredicted RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 ZNF823P16415 610 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ZNF32P17041 273 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SDC1P18827 310 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TAC1P20366 129 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 C4BPBP20851 252 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 CCNOP22674 350 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 HTR1DP28221 377 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 HMOX2P30519 316 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 GRPRP30550 384 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 HSD17B3P37058 310 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 MPV17P39210 176 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 KIR2DS2P43631 304 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 MRPL19P49406 292 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 SERPINB9P50453 376 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 RAB7AP51149 207 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 DLX6P56179 175 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 OR12D2P58182 307 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 DNAJB13P59910 316 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 CDC42P60953 191 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 DSTNP60981 165 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ARF6P62330 175 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 PSG4Q00888 419 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 C2orf80Q0P641 193 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 FUT5Q11128 374 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ASAH1Q13510 395 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 APOFQ13790 326 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SSX2Q16385 188 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SNAPC1Q16533 368 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 MAPK14Q16539 360 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 IMPG1Q17R60 797 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 C18orf21Q32NC0 220 aaPredicted RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 ANKRD55Q3KP44 614 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 GPAT3Q53EU6 434 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 CFAP157Q5JU67 520 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms