RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 NUDCD2Q8WVJ2 157 aa13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 NEIL1Q96FI4 390 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 OR8B2Q96RD0 313 aa13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 CMSS1Q9BQ75 279 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 SHARPINQ9H0F6 387 aa13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 CHMP1AQ9HD42 196 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 C12orf4Q9NQ89 552 aa13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 ING3Q9NXR8 418 aa13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 CTSZQ9UBR2 303 aa13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 SLC25A10Q9UBX3 287 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 ELF5Q9UKW6 265 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-213ENST00000524895 IGHV4-30-2A0A087WSY4 118 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 MGST3O14880 152 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 CA11O75493 328 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 CSN2P05814 226 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 MELTFP08582 738 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 INHBBP09529 407 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 NDUFB7P17568 137 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 GUCA2AQ02747 115 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 DNM1P46Q6ZS02 220 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 GDPD3Q7L5L3 318 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 TRAPPC6BQ86SZ2 158 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 OR5D13Q8NGL4 314 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 PLPPR1Q8TBJ4 325 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 SRRQ9GZT4 340 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 SCPEP1Q9HB40 452 aa13.18□□□□□ -0.3
TSPAN4-213ENST00000524895 NAV2Q8IVL1 2488 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 TMEM30CPA0ZSE6 113 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 MEIOCA2RUB1 952 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 GABARAPH6UMI1 98 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 H7C1Q1 480 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 DVL1O14640 695 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 CTDSPLO15194 276 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 LPLP06858 475 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 SLC25A16P16260 332 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 AESQ08117 197 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 KRBOX4Q5JUW0 171 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 ZNF497Q6ZNH5 498 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 Q8N402 240 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 GDPD1Q8N9F7 314 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 SMIM4Q8WVI0 70 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 FCAMRQ8WWV6 532 aa13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 HDHD3Q9BSH5 251 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 PATZ1Q9HBE1 687 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-213ENST00000524895 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 MEIS3P1A6NDR6 274 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 F5H0A9 414 aaPredicted RBP13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 SULT1C2O00338 296 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 SSX5O60225 188 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 WNT2P09544 360 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 P2RX3P56373 397 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 EDDM3BP56851 147 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 DGCR2P98153 550 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 RSBN1Q5VWQ0 802 aaPredicted RBP13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 SLC35E4Q6ICL7 350 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 CLDND2Q8NHS1 167 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 SETD6Q8TBK2 473 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 RAB39BQ96DA2 213 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 COQ2Q96H96 371 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 RIMS4Q9H426 269 aaPredicted RBP13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 IFT46Q9NQC8 304 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 CLN8Q9UBY8 286 aa13.16□□□□□ -0.3
TSPAN4-213ENST00000524895 MEIKINA0A087WXM9 373 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 J3QRK9 145 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 GSTZ1O43708 216 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 NAPSAO96009 420 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 IGHV2-5P01817 119 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 CD40LGP29965 261 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 CBX5P45973 191 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 NPY4RP50391 375 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 PPP5CP53041 499 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 PAX5Q02548 391 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 ESCO2Q56NI9 601 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 PRSS57Q6UWY2 283 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 FGFRL1Q8N441 504 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 TPRX1Q8N7U7 411 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 OR4K15Q8NH41 348 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 MRPL30Q8TCC3 161 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 GPX8Q8TED1 209 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 H1FXQ92522 213 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 KIF25Q9UIL4 384 aa13.15□□□□□ -0.3
TSPAN4-213ENST00000524895 IGHV4-61A0A0C4DH41 118 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 ODAMA1E959 279 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 GPR37O15354 613 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 MT-ND4P03905 459 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 HEXAP06865 529 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 FCGR3AP08637 254 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 DTYMKP23919 212 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 ERP29P30040 261 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 GLIPR1P48060 266 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 ACTBP60709 375 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 SEC61A1P61619 476 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 GNB2P62879 340 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 ACTG1P63261 375 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 TRIQKQ629K1 86 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 ZNF841Q6ZN19 808 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 MOB1BQ7L9L4 216 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 GAPTQ8N292 157 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms