RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CLPSL1A2RUU4 121 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 SNTNA6NMZ2 147 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 IQCF5A8MTL0 148 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 MGRN1O60291 552 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 OR1I1O60431 355 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 BGLAPP02818 100 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 ERGP11308 486 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 PRKACAP17612 351 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 GPR6P46095 362 aaPredicted RBP3.41□□□□□ -1.86
CPNE3-206ENST00000523469 TMED10P49755 219 aaKnown RBP3.41□□□□□ -1.86
CPNE3-206ENST00000523469 Q3ZCU0 254 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 PPP1R2P3Q6NXS1 205 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 TRIM40Q6P9F5 258 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 BHLHA15Q7RTS1 189 aaPredicted RBP3.41□□□□□ -1.86
CPNE3-206ENST00000523469 CA13Q8N1Q1 262 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 TBC1D19Q8N5T2 526 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 OR10G2Q8NGC3 310 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 FAM81AQ8TBF8 368 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 ZFP90Q8TF47 636 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 LRRC58Q96CX6 371 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 OSBPL11Q9BXB4 747 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 PPA2Q9H2U2 334 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 SLC2A8Q9NY64 477 aa3.41□□□□□ -1.86
CPNE3-206ENST00000523469 OR51F1A6NGY5 319 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 HSBP1L1C9JCN9 74 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 GOLGA8MH3BSY2 632 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 K7EIL1 84 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 M0R1B8 84 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 CBR3O75828 277 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 AQP8O94778 261 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 CATP04040 527 aaKnown RBP3.4□□□□□ -1.87
CPNE3-206ENST00000523469 ZNF823P16415 610 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 MSNP26038 577 aaKnown RBP3.4□□□□□ -1.87
CPNE3-206ENST00000523469 YAP1P46937 504 aaKnown RBP3.4□□□□□ -1.87
CPNE3-206ENST00000523469 ZNF83P51522 516 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 SUB1P53999 127 aaKnown RBP eCLIP3.4□□□□□ -1.87
CPNE3-206ENST00000523469 RAB38P57729 211 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 SLC25A11Q02978 314 aaKnown RBP3.4□□□□□ -1.87
CPNE3-206ENST00000523469 AQP6Q13520 282 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 PDK2Q15119 407 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 GUSBP1Q15486 140 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 SLC9A3R2Q15599 337 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 FAM83EQ2M2I3 478 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 HIKESHIQ53FT3 197 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 XKR7Q5GH72 579 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 RAET1LQ5VY80 246 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 PTRHD1Q6GMV3 140 aaKnown RBP3.4□□□□□ -1.87
CPNE3-206ENST00000523469 PID1Q7Z2X4 250 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 TCAIMQ8N3R3 496 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 PQLC3Q8N755 202 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 TPRX1Q8N7U7 411 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 CLDND2Q8NHS1 167 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 ZNF721Q8TF20 911 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 ITFG2Q969R8 447 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 LRRC45Q96CN5 670 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 COL21A1Q96P44 957 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 MS4A4EQ96PG1 132 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 OR8B4Q96RC9 309 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 SORT1Q99523 831 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 B9D2Q9BPU9 175 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 MFFQ9GZY8 342 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 RAB1BQ9H0U4 201 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 NMRAL1Q9HBL8 299 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 NLE1Q9NVX2 485 aaPredicted RBP3.4□□□□□ -1.87
CPNE3-206ENST00000523469 ZNF639Q9UID6 485 aa3.4□□□□□ -1.87
CPNE3-206ENST00000523469 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
CPNE3-206ENST00000523469 MUC4Q99102 2169 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 DOCK11Q5JSL3 2073 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 TRAV25A0A0B4J276 109 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 GOLGA8TH3BQL2 631 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 CLDN34H7C241 214 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 J3QLI3 93 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 TIMM8AO60220 97 aaPredicted RBP3.39□□□□□ -1.87
CPNE3-206ENST00000523469 GCM2O75603 506 aaPredicted RBP3.39□□□□□ -1.87
CPNE3-206ENST00000523469 LYZL6O75951 148 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 OR7A10O76100 309 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 MPZL1O95297 269 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 ETHE1O95571 254 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 CRYGBP07316 175 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 PMELP40967 661 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 RPS5P46782 204 aaKnown RBP3.39□□□□□ -1.87
CPNE3-206ENST00000523469 TBPL1P62380 186 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 DYNLT1P63172 113 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 BTN3A2P78410 334 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 MERTKQ12866 999 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 BCL2A1Q16548 175 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 TTLL9Q3SXZ7 439 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 EIF3MQ7L2H7 374 aaKnown RBP3.39□□□□□ -1.87
CPNE3-206ENST00000523469 SSX8Q7RTT4 187 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 COMTD1Q86VU5 262 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 CEP112Q8N8E3 955 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 FAM110BQ8TC76 370 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 GLYATL2Q8WU03 294 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 MITD1Q8WV92 249 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 GEMIN6Q8WXD5 167 aaKnown RBP3.39□□□□□ -1.87
CPNE3-206ENST00000523469 PRRC1Q96M27 445 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 TSSK3Q96PN8 268 aa3.39□□□□□ -1.87
CPNE3-206ENST00000523469 CNN2Q99439 309 aaKnown RBP3.39□□□□□ -1.87
CPNE3-206ENST00000523469 KCTD14Q9BQ13 255 aaPredicted RBP3.39□□□□□ -1.87
CPNE3-206ENST00000523469 RGCCQ9H4X1 137 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms