RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PCDHB16Q9NRJ7 776 aa20.43■□□□□ 0.86
PVT1-219ENST00000523427 OR6C3Q9NZP0 311 aa20.43■□□□□ 0.86
PVT1-219ENST00000523427 LSM4Q9Y4Z0 139 aaKnown RBP20.43■□□□□ 0.86
PVT1-219ENST00000523427 A0A1W2PPI3 338 aa20.42■□□□□ 0.86
PVT1-219ENST00000523427 J3QR06 171 aa20.42■□□□□ 0.86
PVT1-219ENST00000523427 KDM4BO94953 1096 aa20.42■□□□□ 0.86
PVT1-219ENST00000523427 SLC6A1P30531 599 aa20.42■□□□□ 0.86
PVT1-219ENST00000523427 TMEM244Q5VVB8 128 aa20.42■□□□□ 0.86
PVT1-219ENST00000523427 UTS2BQ765I0 119 aa20.42■□□□□ 0.86
PVT1-219ENST00000523427 STPG2Q8N412 459 aa20.42■□□□□ 0.86
PVT1-219ENST00000523427 OR13C9Q8NGT0 318 aa20.42■□□□□ 0.86
PVT1-219ENST00000523427 MEIKINA0A087WXM9 373 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 HTR1FP30939 366 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 MADCAM1Q13477 382 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 OR13A1Q8NGR1 328 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 OR2G2Q8NGZ5 317 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 RFESDQ8TAC1 157 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 SPSB1Q96BD6 273 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 NR1H4Q96RI1 486 aaPredicted RBP20.41■□□□□ 0.86
PVT1-219ENST00000523427 CALYQ9NYX4 217 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 KIF25Q9UIL4 384 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 PSG11Q9UQ72 335 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 STAB2Q8WWQ8 2551 aa20.41■□□□□ 0.86
PVT1-219ENST00000523427 A0A1W2PPE3 182 aa20.4■□□□□ 0.86
PVT1-219ENST00000523427 TCRBV3S1A0A5B6 114 aa20.4■□□□□ 0.86
PVT1-219ENST00000523427 NCBP2LA6PVI3 153 aaKnown RBP20.4■□□□□ 0.86
PVT1-219ENST00000523427 RPLP1P05386 114 aaKnown RBP20.4■□□□□ 0.86
PVT1-219ENST00000523427 CSN2P05814 226 aa20.4■□□□□ 0.86
PVT1-219ENST00000523427 ZNF85Q03923 595 aa20.4■□□□□ 0.86
PVT1-219ENST00000523427 COMMD1Q8N668 190 aa20.4■□□□□ 0.86
PVT1-219ENST00000523427 OR10AC1Q8NH08 325 aa20.4■□□□□ 0.86
PVT1-219ENST00000523427 DCLRE1BQ9H816 532 aa20.4■□□□□ 0.86
PVT1-219ENST00000523427 IDI2-AS1Q9NZ38 188 aa20.4■□□□□ 0.86
PVT1-219ENST00000523427 IGHV3-72A0A0B4J1Y9 119 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 C3orf84H3BNL1 204 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 FGF16O43320 207 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 IGHG2P01859 326 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 TMEM225BP0DP42 221 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 TEX38Q6PEX7 206 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 MOB3BQ86TA1 216 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 ZNF565Q8N9K5 539 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 CHST4Q8NCG5 386 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 CCDC197Q8NCU1 140 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 OR13C3Q8NGS6 347 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 UTP4Q969X6 686 aaKnown RBP20.39■□□□□ 0.85
PVT1-219ENST00000523427 RNF166Q96A37 237 aaPredicted RBP20.39■□□□□ 0.85
PVT1-219ENST00000523427 FRRS1LQ9P0K9 344 aa20.39■□□□□ 0.85
PVT1-219ENST00000523427 G3V2T6 193 aa20.38■□□□□ 0.85
PVT1-219ENST00000523427 H0YJX3 145 aa20.38■□□□□ 0.85
PVT1-219ENST00000523427 REG1BP48304 166 aa20.38■□□□□ 0.85
PVT1-219ENST00000523427 GP2P55259 537 aaKnown RBP20.38■□□□□ 0.85
PVT1-219ENST00000523427 PAN3Q58A45 887 aaKnown RBP20.38■□□□□ 0.85
PVT1-219ENST00000523427 C9orf66Q5T8R8 295 aa20.38■□□□□ 0.85
PVT1-219ENST00000523427 OR51A4Q8NGJ6 313 aa20.38■□□□□ 0.85
PVT1-219ENST00000523427 OR5M8Q8NGP6 311 aa20.38■□□□□ 0.85
PVT1-219ENST00000523427 OR10X1Q8NGY0 326 aa20.38■□□□□ 0.85
PVT1-219ENST00000523427 TRAV39A0A0B4J263 110 aa20.37■□□□□ 0.85
PVT1-219ENST00000523427 SEC14L6B5MCN3 397 aa20.37■□□□□ 0.85
PVT1-219ENST00000523427 ATP8B1O43520 1251 aa20.37■□□□□ 0.85
PVT1-219ENST00000523427 C21orf33P30042 268 aaPredicted RBP20.37■□□□□ 0.85
PVT1-219ENST00000523427 POLR2IP36954 125 aaKnown RBP20.37■□□□□ 0.85
PVT1-219ENST00000523427 RAB7AP51149 207 aa20.37■□□□□ 0.85
PVT1-219ENST00000523427 NANOS3P60323 173 aaKnown RBP20.37■□□□□ 0.85
PVT1-219ENST00000523427 CDK5R1Q15078 307 aa20.37■□□□□ 0.85
PVT1-219ENST00000523427 HAVCR2Q8TDQ0 301 aa20.37■□□□□ 0.85
PVT1-219ENST00000523427 MRGPRDQ8TDS7 321 aa20.37■□□□□ 0.85
PVT1-219ENST00000523427 POMPQ9Y244 141 aa20.37■□□□□ 0.85
PVT1-219ENST00000523427 GYG2O15488 501 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 HCKP08631 526 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 CGB3P0DN86 165 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 CGB7P0DN87 165 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 ISL1P61371 349 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 PNLIPRP3Q17RR3 467 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 KLHL22Q53GT1 634 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 CXorf66Q5JRM2 361 aaPredicted RBP20.36■□□□□ 0.85
PVT1-219ENST00000523427 OR8H3Q8N146 312 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 OR51T1Q8NGJ9 327 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 EME1Q96AY2 570 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 MBOAT4Q96T53 435 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 OSBPL10Q9BXB5 764 aa20.36■□□□□ 0.85
PVT1-219ENST00000523427 AP4M1O00189 453 aa20.35■□□□□ 0.85
PVT1-219ENST00000523427 ZFPL1O95159 310 aa20.35■□□□□ 0.85
PVT1-219ENST00000523427 LY86O95711 162 aa20.35■□□□□ 0.85
PVT1-219ENST00000523427 IL1AP01583 271 aa20.35■□□□□ 0.85
PVT1-219ENST00000523427 GPR50Q13585 617 aa20.35■□□□□ 0.85
PVT1-219ENST00000523427 KDM4DQ6B0I6 523 aa20.35■□□□□ 0.85
PVT1-219ENST00000523427 OR8U1Q8NH10 309 aa20.35■□□□□ 0.85
PVT1-219ENST00000523427 BARHL1Q9BZE3 327 aa20.35■□□□□ 0.85
PVT1-219ENST00000523427 HTR1AP08908 422 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 SSTR5P35346 364 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 GPR12P47775 334 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 ZSCAN26Q16670 478 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 LPCAT4Q643R3 524 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 SAXO1Q8IYX7 474 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 EAF1Q96JC9 268 aaPredicted RBP20.34■□□□□ 0.85
PVT1-219ENST00000523427 CIB1Q99828 191 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 RIBC2Q9H4K1 309 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 MYRFQ9Y2G1 1151 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 TENM2Q9NT68 2774 aa20.34■□□□□ 0.85
PVT1-219ENST00000523427 HSD17B6O14756 317 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms