RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 OR52H1Q8NGJ2 320 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 OR2G2Q8NGZ5 317 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 OR52N1Q8NH53 320 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SYNPRQ8TBG9 265 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 KLF14Q8TD94 323 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 HAVCR2Q8TDQ0 301 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SPRYD4Q8WW59 207 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 RORBQ92753 470 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 MRPL24Q96A35 216 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 PELI1Q96FA3 418 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF799Q96GE5 643 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 C4orf36Q96KX1 117 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 LURAP1Q96LR2 239 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CDCA4Q9BXL8 241 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 OR2J1Q9GZK6 312 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 PBOV1Q9GZY1 135 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 OR51B6Q9H340 312 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 RIMS4Q9H426 269 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 RGCCQ9H4X1 137 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ISG20L2Q9H9L3 353 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CBLN4Q9NTU7 201 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 FAIMQ9NVQ4 179 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 FAM206AQ9NX38 181 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 BABAM2Q9NXR7 383 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 PTTG3PQ9NZH4 202 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF319Q9P2F9 582 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ERVK-18Q9QC07 812 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 NUFIP1Q9UHK0 495 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CLEC2DQ9UHP7 191 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 PURGQ9UJV8 347 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 GNG8Q9UK08 70 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 OR52A1Q9UKL2 312 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CAB39Q9Y376 341 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 N6AMT1Q9Y5N5 214 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SNX5Q9Y5X3 404 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 R4GMQ9 66 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CFAP47Q6ZTR5 3102 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 ITPR1Q14643 2758 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 DSPP15924 2871 aaKnown RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 NCOA6Q14686 2063 aaPredicted RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 A0A1B0GTI1 187 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 hCG_38984A0A1B0GV85 526 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 A0A1B0GVI7 797 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 A0A1B0GWJ7 208 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 LOC390937A0A1W2PQ73 354 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 MEX3AA1L020 520 aaKnown RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 TRIM64A6NGJ6 449 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 GGT3PA6NGU5 568 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 OR4C45A6NMZ5 311 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 CD300LBA8K4G0 201 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 IQCF6A8MYZ5 107 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 M0R233 179 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 SLC33A1O00400 549 aaPredicted RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 SOCS3O14543 225 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 TIMM8AO60220 97 aaPredicted RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 MTRF1O75570 445 aaKnown RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 IGLV3-1P01715 115 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 TTRP02766 147 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 ISG15P05161 165 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 RPSAP08865 295 aaKnown RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 HTR1AP08908 422 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 ATP6V1B1P15313 513 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 AADACP22760 399 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 DDOSTP39656 456 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 ALDH3B1P43353 468 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 KIR3DL2P43630 455 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 NPBWR1P48145 328 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 KLF3P57682 345 aaPredicted RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 SNRPD2P62316 118 aaKnown RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 FAM3AP98173 230 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 ZNF92Q03936 586 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 MFGE8Q08431 387 aaPredicted RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 GK2Q14410 553 aaPredicted RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 SPHARQ15513 63 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 ALKBH6Q3KRA9 238 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 MOGAT2Q3SYC2 334 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 CCDC58Q4VC31 144 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 TMEM255AQ5JRV8 349 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 SPATA46Q5T0L3 261 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 BCL2L15Q5TBC7 163 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 OR2G6Q5TZ20 316 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 TMEM244Q5VVB8 128 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 DMKNQ6E0U4 476 aaPredicted RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 OR2T2Q6IF00 324 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 C11orf71Q6IPW1 123 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 FAM166AQ6J272 317 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 RPL22L1Q6P5R6 122 aaKnown RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 MYO7BQ6PIF6 2116 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 PAMR1Q6UXH9 720 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 PGAP1Q75T13 922 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 LRP11Q86VZ4 500 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 CATSPERDQ86XM0 798 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 CROCCP3Q8IVE0 287 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 PRSS35Q8N3Z0 413 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 KLHDC1Q8N7A1 406 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 CCDC54Q8NEL0 328 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 OR4D10Q8NGI6 311 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 OR13G1Q8NGZ3 307 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 OR51E1Q8TCB6 317 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 RPS4Y2Q8TD47 263 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms