RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 CSKP41240 450 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 CRISP1P54107 249 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 DEFA1P59665 94 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 DEFA3P59666 94 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 UBE2G2P60604 165 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 PKIAP61925 76 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 DYNLL1P63167 89 aaKnown RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 TNNC1P63316 161 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 TFAMQ00059 246 aaKnown RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 GTF2BQ00403 316 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 IRF8Q02556 426 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 ZNF816Q0VGE8 651 aaPredicted RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 BTN1A1Q13410 526 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 ALKBH6Q3KRA9 238 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 BEX5Q5H9J7 111 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 AVPI1Q5T686 147 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 OGFRL1Q5TC84 451 aaPredicted RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 ZNF470Q6ECI4 717 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 EIF3MQ7L2H7 374 aaKnown RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 PID1Q7Z2X4 250 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 C8orf59Q8N0T1 100 aaPredicted RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 TMEM256Q8N2U0 113 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 CBR4Q8N4T8 237 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 ATPAF2Q8N5M1 289 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 ZNF283Q8N7M2 679 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 OR2M7Q8NG81 312 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 OR11H7Q8NGC8 314 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 OR5B17Q8NGF7 314 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 OR52E2Q8NGJ4 325 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 OR13D1Q8NGV5 346 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 CIRBP-AS1Q8TBR5 109 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 GLYATL2Q8WU03 294 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 RAB2BQ8WUD1 216 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 PIH1D2Q8WWB5 315 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 RBPMSQ93062 196 aaKnown RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 RNF170Q96K19 258 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 CNBD2Q96M20 576 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 APOL4Q9BPW4 351 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 TBL1YQ9BQ87 522 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 FGF23Q9GZV9 251 aaPredicted RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 PCBD2Q9H0N5 130 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 TRABDQ9H4I3 376 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 CSNK1G1Q9HCP0 422 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 MTFP1Q9UDX5 166 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 MARCOQ9UEW3 520 aaPredicted RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 NDRG2Q9UN36 371 aaKnown RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 SLC22A13Q9Y226 551 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 OR51B4Q9Y5P0 310 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 PPRC1Q5VV67 1664 aaKnown RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 ABCA9Q8IUA7 1624 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 DOCK8Q8NF50 2099 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 ADAMTS12P58397 1594 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 ATP10BO94823 1461 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 PZPP20742 1482 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 ERVK-7P63135 1459 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 GRIN2BQ13224 1484 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 MBD5Q9P267 1494 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 ANKARQ7Z5J8 1434 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 NSD3Q9BZ95 1437 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 USP42Q9H9J4 1324 aaKnown RBP2.77□□□□□ -1.97
SKP1-208ENST00000521216 GCC2Q8IWJ2 1684 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 A0A1W2PPV4 95 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 MKRN2OSH3BPM6 223 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 CDIPTO14735 213 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 SCAMP2O15127 329 aaKnown RBP2.77□□□□□ -1.97
SKP1-208ENST00000521216 GYG2O15488 501 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 CHST10O43529 356 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 REM1O75628 298 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 PIAS1O75925 651 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 VAPBO95292 243 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 IFNA17P01571 189 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 HLA-DQB1P01920 261 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 C1QBP02746 253 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 TSPAN19P0C672 248 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 GIMD1P0DJR0 217 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 IFI30P13284 250 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 ZNF7P17097 686 aaPredicted RBP2.77□□□□□ -1.97
SKP1-208ENST00000521216 SLC6A1P30531 599 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 SDC4P31431 198 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 S100A11P31949 105 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 ETV6P41212 452 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 SLC18A1P54219 525 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 DAOAP59103 153 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 RPS20P60866 119 aaKnown RBP2.77□□□□□ -1.97
SKP1-208ENST00000521216 RAB2AP61019 212 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 ERVS71-1P61550 626 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 RPS23P62266 143 aaKnown RBP2.77□□□□□ -1.97
SKP1-208ENST00000521216 CDK5Q00535 292 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 MYL5Q02045 173 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 IMPG1Q17R60 797 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 PLCXD3Q63HM9 321 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 LPCAT3Q6P1A2 487 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 ULK3Q6PHR2 472 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 CLEC18BQ6UXF7 455 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 SLC16A13Q7RTY0 426 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 COMMD7Q86VX2 200 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 FAM71AQ8IYT1 594 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 SELENOHQ8IZQ5 122 aaKnown RBP2.77□□□□□ -1.97
SKP1-208ENST00000521216 LRRC18Q8N456 261 aa2.77□□□□□ -1.97
SKP1-208ENST00000521216 NPWQ8N729 165 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms