RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 GDPGP1Q6ZNW5 385 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 SLC16A12Q6ZSM3 486 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 KCNG3Q8TAE7 436 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 NANPQ8TBE9 248 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 TNFRSF14Q92956 283 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 LHX4Q969G2 390 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 CST11Q9H112 138 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 LPAR5Q9H1C0 372 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 IFT22Q9H7X7 185 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 LIN7BQ9HAP6 207 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 DAPK2Q9UIK4 370 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 KIF25Q9UIL4 384 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 PEX16Q9Y5Y5 336 aa10.15□□□□□ -0.78
CLK4-208ENST00000520957 TRAV40A0A0B4J280 105 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 A0A1W2PRD5 423 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 A0A1W2PRF3 423 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 A0A1W2PRM7 423 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 NOTOA8MTQ0 251 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 AIPO00170 330 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 SOCS1O15524 211 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 PAHP00439 452 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 HNF1AP20823 631 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 KLRD1Q13241 179 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 MPV17LQ2QL34 196 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 RUSC1-AS1Q66K80 236 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 RAB12Q6IQ22 244 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 TPRA1Q86W33 373 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 PNKDQ8N490 385 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 PPP1R35Q8TAP8 253 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 TMEM59Q9BXS4 323 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 RCC2Q9P258 522 aaKnown RBP10.15□□□□□ -0.79
CLK4-208ENST00000520957 ZNF69Q9UC07 566 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 KPTNQ9Y664 436 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 C2CD3Q4AC94 2353 aa10.15□□□□□ -0.79
CLK4-208ENST00000520957 ODAMA1E959 279 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 UBE2QL1A1L167 161 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 RNASEK-C17orf49H0YIS7 233 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 CSN2P05814 226 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 FAM157CP0CG43 387 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 SNRPBP14678 240 aaKnown RBP10.14□□□□□ -0.79
CLK4-208ENST00000520957 FUT3P21217 361 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 OMGP23515 440 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 ERP29P30040 261 aaKnown RBP10.14□□□□□ -0.79
CLK4-208ENST00000520957 TMEM50BP56557 158 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 SRSF2Q01130 221 aaKnown RBP10.14□□□□□ -0.79
CLK4-208ENST00000520957 CTF1Q16619 201 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 NKAPLQ5M9Q1 402 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 UTF1Q5T230 341 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 RSBN1Q5VWQ0 802 aaPredicted RBP10.14□□□□□ -0.79
CLK4-208ENST00000520957 SFXN4Q6P4A7 337 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 BAIAP2L2Q6UXY1 529 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 ZNF782Q6ZMW2 699 aaPredicted RBP10.14□□□□□ -0.79
CLK4-208ENST00000520957 C6orf201Q7Z4U5 140 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 C5orf24Q7Z6I8 188 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 PRIMA1Q86XR5 153 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 FAAP24Q9BTP7 215 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 LPAR3Q9UBY5 353 aa10.14□□□□□ -0.79
CLK4-208ENST00000520957 ATRQ13535 2644 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 MEIKINA0A087WXM9 373 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 hADV38S2A0JD32 116 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 ZNF728P0DKX0 622 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 PRTN3P24158 256 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 CFPP27918 469 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 GDNFP39905 211 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 MEF2CQ06413 473 aaPredicted RBP10.13□□□□□ -0.79
CLK4-208ENST00000520957 MOGAT2Q3SYC2 334 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 TIMM50Q3ZCQ8 353 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 HCP5Q6MZN7 132 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 LINC00596Q86U02 117 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 FAM89BQ8N5H3 189 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 KIR3DL3Q8N743 410 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 OR13A1Q8NGR1 328 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 CCDC107Q8WV48 283 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 SULT4A1Q9BR01 284 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 TM2D1Q9BX74 207 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 BARHL1Q9BZE3 327 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 NUP50Q9UKX7 468 aa10.13□□□□□ -0.79
CLK4-208ENST00000520957 FBN1P35555 2871 aaKnown RBP10.13□□□□□ -0.79
CLK4-208ENST00000520957 FOXI3A8MTJ6 420 aaPredicted RBP10.12□□□□□ -0.79
CLK4-208ENST00000520957 C17orf98A8MV24 154 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 MCRIP1C9JLW8 97 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 M0R1W7 72 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 PDCD6O75340 191 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 MT-ND4P03905 459 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 CGB3P0DN86 165 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 CGB7P0DN87 165 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 EPHA1P21709 976 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 CHATP28329 748 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 BLVRBP30043 206 aaPredicted RBP10.12□□□□□ -0.79
CLK4-208ENST00000520957 VEGFCP49767 419 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 IDNKQ5T6J7 187 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 FAM53AQ6NSI3 398 aaPredicted RBP10.12□□□□□ -0.79
CLK4-208ENST00000520957 C1orf122Q6ZSJ8 110 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 OR2W3Q7Z3T1 314 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 GPR141Q7Z602 305 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 TRAPPC6BQ86SZ2 158 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 ANKRD13BQ86YJ7 626 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 CMTM4Q8IZR5 234 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 OR5H6Q8NGV6 325 aa10.12□□□□□ -0.79
CLK4-208ENST00000520957 RFESDQ8TAC1 157 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms