RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 RNF222A6NCQ9 220 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 H0YIZ8 118 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 H3BP45 60 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 RPL36A-HNRNPH2H7BZ11 118 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 TERTO14746 1132 aaKnown RBP9.73□□□□□ -0.85
CLK4-206ENST00000520878 B3GALNT1O75752 331 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 CD8AP01732 235 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 UCP2P55851 309 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 PRAMEF6Q5VXH4 476 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 TMEM211Q6ICI0 200 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 ZNF808Q8N4W9 903 aaPredicted RBP9.73□□□□□ -0.85
CLK4-206ENST00000520878 TPRX1Q8N7U7 411 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 ASB13Q8WXK3 278 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 RRNAD1Q96FB5 475 aaKnown RBP9.73□□□□□ -0.85
CLK4-206ENST00000520878 NMES1Q9C002 83 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 MS4A7Q9GZW8 240 aaPredicted RBP9.73□□□□□ -0.85
CLK4-206ENST00000520878 CPAMD8Q8IZJ3 1885 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 OR5B21A6NL26 309 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 B8ZZF3 427 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 ST8SIA3O43173 380 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 IGHV3-13P01766 116 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 IGHV3-7P01780 117 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 NAT1P18440 290 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 NSUN5P2Q63ZY6 315 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 TMEM65Q6PI78 240 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 BEND4Q6ZU67 534 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 GLS2Q9UI32 602 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 POLDIP2Q9Y2S7 368 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 IGF2RP11717 2491 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 TFF1P04155 84 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 HOXA4Q00056 320 aaPredicted RBP9.72□□□□□ -0.85
CLK4-206ENST00000520878 SURF2Q15527 256 aaPredicted RBP9.72□□□□□ -0.85
CLK4-206ENST00000520878 DEFB108BQ8NET1 73 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 OR2Z1Q8NG97 314 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 OR1S2Q8NGQ3 325 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 ANGPTL6Q8NI99 470 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 PRRX2Q99811 253 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 PCDHB10Q9UN67 800 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 COL5A1P20908 1838 aaPredicted RBP9.72□□□□□ -0.85
CLK4-206ENST00000520878 BORCS7-ASMTA0A0B4J1R7 106 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 C3orf85A0A1B0GTC6 90 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 H0YL77 283 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 SLC25A4P12235 298 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 M6PRP20645 277 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 TMEM42Q69YG0 159 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 TBC1D26Q86UD7 250 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 SLC38A6Q8IZM9 456 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 LIME1Q9H400 295 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 TREM2Q9NZC2 230 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 MGAQ8IWI9 3026 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 PQLC2LA1A4F0 135 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 F8W036 122 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 SH2D1BO14796 132 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 SSSCA1O60232 199 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 NKX2-1P43699 371 aaPredicted RBP9.72□□□□□ -0.85
CLK4-206ENST00000520878 BLOC1S1P78537 153 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 MYPOPQ86VE0 399 aaPredicted RBP9.72□□□□□ -0.85
CLK4-206ENST00000520878 LHFPL1Q86WI0 220 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 SSC4DQ8WTU2 575 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 RNF141Q8WVD5 230 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 OR5P3Q8WZ94 311 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 RASL12Q9NYN1 266 aa9.72□□□□□ -0.85
CLK4-206ENST00000520878 TLN1Q9Y490 2541 aaKnown RBP9.72□□□□□ -0.85
CLK4-206ENST00000520878 MPPED1O15442 326 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 COX5BP10606 129 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 ZNF169Q14929 603 aaPredicted RBP9.71□□□□□ -0.85
CLK4-206ENST00000520878 TUSC1Q2TAM9 212 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 ZNF718Q3SXZ3 478 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 CRIP3Q6Q6R5 217 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 ARL11Q969Q4 196 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 PIK3IP1Q96FE7 263 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 CNTNAP3BQ96NU0 1288 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 RNF126Q9BV68 326 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 CNTNAP3Q9BZ76 1288 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 FAM234AQ9H0X4 552 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 SLC25A32Q9H2D1 315 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 OPA3Q9H6K4 179 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 RNF122Q9H9V4 155 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 CST7O76096 145 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 TMEM33P57088 247 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 POLR2GP62487 172 aaKnown RBP eCLIP9.71□□□□□ -0.85
CLK4-206ENST00000520878 NRN1LQ496H8 165 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 SLC35G3Q8N808 338 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 SCCPDHQ8NBX0 429 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 PLK3Q9H4B4 646 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 ASCL3Q9NQ33 180 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 FBXL17Q9UF56 701 aa9.71□□□□□ -0.85
CLK4-206ENST00000520878 NCKAP5O14513 1909 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 AKAP6Q13023 2319 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 TRDCB7Z8K6 153 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 J3QT63 122 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 GPR31O00270 319 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 WNT9BO14905 357 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 ADAM20O43506 726 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 CAMLGP49069 296 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 EDDM3BP56851 147 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 SELENOVP59797 346 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 DHODHQ02127 395 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 LIAT1Q6ZQX7 453 aa9.71□□□□□ -0.86
CLK4-206ENST00000520878 KLF14Q8TD94 323 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms