RNA–Protein interactions for RNA: ENST00000520571.1

DENND3-213, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-213	ENST00000520571	HSD17B12	Q53GQ0	312 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	PLA1A	Q53H76	456 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	ATAD3C	Q5T2N8	411 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	BRICD5	Q6PL45	260 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	NKAIN3	Q8N8D7	197 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	OR4D6	Q8NGJ1	314 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	COQ2	Q96H96	371 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	SSX3	Q99909	188 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	DPCD	Q9BVM2	203 aa	Predicted RBP	11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	BARHL1	Q9BZE3	327 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	ZNF581	Q9P0T4	197 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	SESN1	Q9Y6P5	492 aa		11.22	□□□□□ -0.61
DENND3-213	ENST00000520571	MEGF11	A6BM72	1044 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	FAM172BP	A6NC97	362 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	CRTAP	O75718	401 aa	Predicted RBP	11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	MMP23A	O75900	390 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	CDK2	P24941	298 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	CFP	P27918	469 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	GLP1R	P43220	463 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	COMP	P49747	757 aa	Predicted RBP	11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	MLLT11	Q13015	90 aa	Predicted RBP	11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	TPBG	Q13641	420 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	GPR176	Q14439	515 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	UNQ9370/PRO34162	Q6UXP9	181 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	LHFPL4	Q7Z7J7	247 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	CDH26	Q8IXH8	852 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	SUMF2	Q8NBJ7	301 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	BEND2	Q8NDZ0	799 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571		Q8NFD4	153 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	NEK7	Q8TDX7	302 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	DYRK2	Q92630	601 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	MGLL	Q99685	303 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	SELENOI	Q9C0D9	397 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	TMEM133	Q9H2Q1	129 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	BANF2	Q9H503	90 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	OR6C3	Q9NZP0	311 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	KIF25	Q9UIL4	384 aa		11.21	□□□□□ -0.61
DENND3-213	ENST00000520571	TRAV39	A0A0B4J263	110 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571		H3BUX3	64 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	CSN2	P05814	226 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	CPE	P16870	476 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	SRM	P19623	302 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	MDK	P21741	143 aa	Predicted RBP	11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	NFYB	P25208	207 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	GP2	P55259	537 aa	Known RBP	11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	RAG2	P55895	527 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	SSX2	Q16385	188 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	LY6E	Q16553	131 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	LTC4S	Q16873	150 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	LRRC75B	Q2VPJ9	315 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	NHLRC3	Q5JS37	347 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	BAIAP2L2	Q6UXY1	529 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	ZNF565	Q8N9K5	539 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	OR5R1	Q8NH85	324 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	CORO2A	Q92828	525 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	FAM46B	Q96A09	425 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	AJUBA	Q96IF1	538 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	UQCC2	Q9BRT2	126 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	CLEC7A	Q9BXN2	247 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	SLITRK2	Q9H156	845 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	TAS2R3	Q9NYW6	316 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	VPREB3	Q9UKI3	123 aa		11.2	□□□□□ -0.62
DENND3-213	ENST00000520571	IGHV2-26	A0A0B4J1V2	119 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	DENR	O43583	198 aa	Known RBP	11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	TRAM1	Q15629	374 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	FAM189A2	Q15884	450 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	MPV17L	Q2QL34	196 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	GLT8D1	Q68CQ7	371 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	HEPN1	Q6WQI6	88 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	GDPGP1	Q6ZNW5	385 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	ZNF367	Q7RTV3	350 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	LINC00596	Q86U02	117 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	LRRTM1	Q86UE6	522 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	OR11H6	Q8NGC7	330 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	OR4F5	Q8NH21	305 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	NDNF	Q8TB73	568 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	PLPPR1	Q8TBJ4	325 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	MRGPRD	Q8TDS7	321 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	PHYHIP	Q92561	330 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	ISYNA1	Q9NPH2	558 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	ACOT13	Q9NPJ3	140 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	C1RL	Q9NZP8	487 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	HILPDA	Q9Y5L2	63 aa		11.19	□□□□□ -0.62
DENND3-213	ENST00000520571	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	ZNF729	A6NN14	1252 aa	Predicted RBP	11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	ODF3B	A8MYP8	253 aa		11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	TOR1A	O14656	332 aa		11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	UCHL1	P09936	223 aa		11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	MGMT	P16455	207 aa		11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	PSMA1	P25786	263 aa	Known RBP	11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	GDNF	P39905	211 aa		11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	KCNJ3	P48549	501 aa		11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	RAB13	P51153	203 aa		11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	GABARAPL2	P60520	117 aa		11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	EMX1	Q04741	257 aa	Predicted RBP	11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	TBCE	Q15813	527 aa	Predicted RBP	11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.18	□□□□□ -0.62
DENND3-213	ENST00000520571	ZNF626	Q68DY1	528 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms