RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 GSG1LQ6UXU4 331 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 SPERTQ8NA61 448 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 OR10H4Q8NGA5 316 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 OR5AP2Q8NGF4 316 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 OR56B2PQ8NGI1 322 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 OR2T27Q8NH04 317 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 CLDND2Q8NHS1 167 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 SPATA3Q8NHX4 192 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 OR8B4Q96RC9 309 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 APOL4Q9BPW4 351 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 TMEM106BQ9NUM4 274 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 FAM206AQ9NX38 181 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF391Q9UJN7 358 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.63□□□□□ -1.51
SDCBP-208ENST00000520228 COPS3Q9UNS2 423 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 WIPI2Q9Y4P8 454 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 GMPPBQ9Y5P6 360 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF469Q96JG9 3925 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-208ENST00000520228 HEATR1Q9H583 2144 aaKnown RBP5.62□□□□□ -1.51
SDCBP-208ENST00000520228 JMJD1CQ15652 2540 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 LOC100130705A0A1B0GUX0 176 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 hCG_38984A0A1B0GV85 526 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 A0A1W2PQL4 384 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-208ENST00000520228 ISPDA4D126 451 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 SNTNA6NMZ2 147 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 B4DSR2 109 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 MAGEB4O15481 346 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-208ENST00000520228 MPZL2O60487 215 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 KRT8P05787 483 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 ADRA2CP18825 462 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 CD200P41217 278 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 LMO4P61968 165 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 MAB21L1Q13394 359 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 SNCBQ16143 134 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 LRRC36Q1X8D7 754 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF829Q3KNS6 432 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-208ENST00000520228 LPCAT4Q643R3 524 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 FAM166AQ6J272 317 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 FTMTQ8N4E7 242 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 YIPF7Q8N8F6 280 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 ADAD2Q8NCV1 583 aaKnown RBP5.62□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF555Q8NEP9 628 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 OR8B12Q8NGG6 310 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 OR11L1Q8NGX0 322 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 OR8S1Q8NH09 359 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 RHOXF1Q8NHV9 184 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 MRGPRDQ8TDS7 321 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 RAB39BQ96DA2 213 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 Q96MT0 163 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 RDH12Q96NR8 316 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 TBX5Q99593 518 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 GAL3ST1Q99999 423 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 ADAT1Q9BUB4 502 aaKnown RBP5.62□□□□□ -1.51
SDCBP-208ENST00000520228 TTTY10Q9BZA0 68 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 PBOV1Q9GZY1 135 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 WDR13Q9H1Z4 485 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF665Q9H7R5 613 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 FN3KRPQ9HA64 309 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 C8orf4Q9NR00 106 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 DCAF16Q9NXF7 216 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 SMPD3Q9NY59 655 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-208ENST00000520228 MRM2Q9UI43 246 aaKnown RBP5.62□□□□□ -1.51
SDCBP-208ENST00000520228 KCNK7Q9Y2U2 307 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 RHBDD3Q9Y3P4 386 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 NPTNQ9Y639 398 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 C2CD3Q4AC94 2353 aa5.62□□□□□ -1.51
SDCBP-208ENST00000520228 TRBV5-5A0A0J9YX44 114 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 A0A0U1RQV5 110 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 ERICH4A6NGS2 130 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 METTL15A6NJ78 407 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 LOC110117498-PIK3R3F6TDL0 507 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 CRLF1O75462 422 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 SULT1C4O75897 302 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 RPP14O95059 124 aaKnown RBP5.61□□□□□ -1.51
SDCBP-208ENST00000520228 CYB5R3P00387 301 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-208ENST00000520228 PNPP00491 289 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 CST4P01036 141 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 RBMXP38159 391 aaKnown RBP5.61□□□□□ -1.51
SDCBP-208ENST00000520228 MDH2P40926 338 aaKnown RBP5.61□□□□□ -1.51
SDCBP-208ENST00000520228 PMELP40967 661 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 BTG1P62324 171 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 ACTC1P68032 377 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 ACTA1P68133 377 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 IL5RAQ01344 420 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 MFGE8Q08431 387 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-208ENST00000520228 ZMYND11Q15326 602 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 OR8B8Q15620 311 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 MPPED2Q15777 294 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 ZFHX3Q15911 3703 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF181Q2M3W8 571 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 BCL2L15Q5TBC7 163 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 PRAMEF6Q5VXH4 476 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 LIPNQ5VXI9 398 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 PLEKHG7Q6ZR37 379 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 SSX6Q7RTT6 188 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 LRRC28Q86X40 367 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-208ENST00000520228 ENTHD1Q8IYW4 607 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 SPICQ8N5J4 248 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 PACRGLQ8N7B6 248 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF420Q8TAQ5 688 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms