RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 ZNF714Q96N38 554 aa9.72□□□□□ -0.85
HPS4-218ENST00000519774 TMEM59Q9BXS4 323 aa9.72□□□□□ -0.85
HPS4-218ENST00000519774 RNF167Q9H6Y7 350 aa9.72□□□□□ -0.85
HPS4-218ENST00000519774 METTL8Q9H825 291 aaKnown RBP9.72□□□□□ -0.85
HPS4-218ENST00000519774 LINC00312Q9Y6C7 94 aa9.72□□□□□ -0.85
HPS4-218ENST00000519774 TRGV10A0A0A0MS01 117 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 CENPVL3A0A0U1RRI6 287 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 hCG_1809904A0A1W2PP81 198 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 A0A1W2PPE2 198 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 A0A1W2PR64 198 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 A0A1W2PRV1 198 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 ODAMA1E959 279 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 RNASEK-C17orf49H0YIS7 233 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 ZNF728P0DKX0 622 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 CD37P11049 281 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 ARSBP15848 533 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 COX7A1P24310 79 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 FPR2P25090 351 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 GLP1RP43220 463 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 PSMD7P51665 324 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 DLX6P56179 175 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 ERVFRD-1P60508 538 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 RPS27AP62979 156 aaKnown RBP9.71□□□□□ -0.86
HPS4-218ENST00000519774 UNC119Q13432 240 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 TIMM50Q3ZCQ8 353 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 NKAPLQ5M9Q1 402 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 RAB12Q6IQ22 244 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 OR51D1Q8NGF3 324 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 KCNG3Q8TAE7 436 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 SLC25A28Q96A46 364 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 FAM3DQ96BQ1 224 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 YIPF6Q96EC8 236 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 KCTD7Q96MP8 289 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 CENPOQ9BU64 300 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 IFT22Q9H7X7 185 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 SPACA1Q9HBV2 294 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 STEAP1Q9UHE8 339 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 KIF25Q9UIL4 384 aa9.71□□□□□ -0.86
HPS4-218ENST00000519774 SOX21Q9Y651 276 aaPredicted RBP9.71□□□□□ -0.86
HPS4-218ENST00000519774 ANK3Q12955 4377 aaKnown RBP9.71□□□□□ -0.86
HPS4-218ENST00000519774 MEIKINA0A087WXM9 373 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 A0A0B4J203 849 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 IGHV1-69DA0A0B4J2H0 117 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 MDFIC2A0A1B0GVS7 189 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A10PA6NDY2 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A18PA6NE21 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A16PA6NEW6 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A20PA6NIJ5 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A8PA6NJQ4 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A7PA6NKC0 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 IFITM5A6NNB3 132 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A22PA8MWA6 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 TMEM14DPA8MWL7 114 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A12PA8MX19 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A5PA8MXJ8 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A23PA8MXZ1 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 MCRIP1C9JLW8 97 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 AIREO43918 545 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 IGHV1-69P01742 117 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 CLEC2LP0C7M8 214 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A15PP0C7V4 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A13PP0C7W8 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A14PP0C7W9 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 FAM90A24PP0C7X0 464 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 SLC2A2P11168 524 aaPredicted RBP9.7□□□□□ -0.86
HPS4-218ENST00000519774 PRTN3P24158 256 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 KCNJ3P48549 501 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 LSM3P62310 102 aaKnown RBP9.7□□□□□ -0.86
HPS4-218ENST00000519774 SRSF2Q01130 221 aaKnown RBP9.7□□□□□ -0.86
HPS4-218ENST00000519774 MXD1Q05195 221 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 RSBN1Q5VWQ0 802 aaPredicted RBP9.7□□□□□ -0.86
HPS4-218ENST00000519774 NCR3LG1Q68D85 454 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 C1orf122Q6ZSJ8 110 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 OR2W3Q7Z3T1 314 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 NR2C2APQ86WQ0 139 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 PNKDQ8N490 385 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 ZNF418Q8TF45 676 aaPredicted RBP9.7□□□□□ -0.86
HPS4-218ENST00000519774 NICN1Q9BSH3 213 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 SUCNR1Q9BXA5 334 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 MRPS26Q9BYN8 205 aaKnown RBP9.7□□□□□ -0.86
HPS4-218ENST00000519774 BARHL1Q9BZE3 327 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 RCC2Q9P258 522 aaKnown RBP9.7□□□□□ -0.86
HPS4-218ENST00000519774 PEX16Q9Y5Y5 336 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 KIAA2026Q5HYC2 2103 aa9.7□□□□□ -0.86
HPS4-218ENST00000519774 TRAV39A0A0B4J263 110 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 TMEM30CPA0ZSE6 113 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 UBE2QL1A1L167 161 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 C17orf98A8MV24 154 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 TCF21O43680 179 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 PDCD6O75340 191 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 CLPXO76031 633 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 FUT3P21217 361 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 SDC2P34741 201 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 TGFBR1P36897 503 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 RANBP1P43487 201 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 QRFPP83859 136 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 RBM39Q14498 530 aaKnown RBP9.69□□□□□ -0.86
HPS4-218ENST00000519774 ZFHX3Q15911 3703 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 C2orf76Q3KRA6 126 aa9.69□□□□□ -0.86
HPS4-218ENST00000519774 PRAMEF5Q5TYX0 476 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms