RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 HMGA2P52926 109 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 DLK1P80370 383 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 CBX1P83916 185 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 SCARB2Q14108 478 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 ODF1Q14990 250 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 CEACAM21Q3KPI0 293 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 RNF212Q495C1 297 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 GCNT6Q5T4J0 391 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 KRT73Q86Y46 540 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 TIGD4Q8IY51 512 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 YIPF7Q8N8F6 280 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 FAM156AQ8NDB6 213 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 OR2AJ1Q8NGZ0 328 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 ZNRF2Q8NHG8 242 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 TMEM163Q8TC26 289 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 COPS4Q9BT78 406 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 FAM103A1Q9BTL3 118 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 VIPAS39Q9H9C1 493 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 NRIP3Q9NQ35 241 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 PNPOQ9NVS9 261 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 MLXQ9UH92 298 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 DCDC2Q9UHG0 476 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 MED31Q9Y3C7 131 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 IGHV4-28A0A0C4DH34 117 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 TVP23AA6NH52 213 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 C2orf70A6NJV1 201 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 J3QT63 122 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 FCN1O00602 326 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 RENP00797 406 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 HLA-DQA2P01906 255 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 SLPIP03973 132 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 TRGV3P03979 118 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 ANXA2P07355 339 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 ERP29P30040 261 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 SLC6A6P31641 620 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 PHBP35232 272 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 HAAOP46952 286 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 CX3CR1P49238 355 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 AESQ08117 197 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 ODF3L2Q3SX64 289 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 PGM2L1Q6PCE3 622 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 DCXRQ7Z4W1 244 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 OAFQ86UD1 273 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 ANGPTL5Q86XS5 388 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 RNF148Q8N7C7 305 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 OR8H1Q8NGG4 311 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 ACMSDQ8TDX5 336 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 DYNLRB2Q8TF09 96 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 GTF2H4Q92759 462 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 TAMM41Q96BW9 452 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 SLAMF6Q96DU3 332 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 GAL3ST2Q9H3Q3 398 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 AIG1Q9NVV5 245 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 TAS2R3Q9NYW6 316 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 MTCH1Q9NZJ7 389 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 AMMECR1Q9Y4X0 333 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 IER3IP1Q9Y5U9 82 aa4.78□□□□□ -1.64
CTNNA1-216ENST00000519489 EFCAB9A8MZ26 197 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 ITM2AO43736 263 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 INMTO95050 263 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 TXNDC12O95881 172 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 GAPDHP04406 335 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 P0C879 139 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 GABRR1P24046 479 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 MPZP25189 248 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 ZNF121P58317 390 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 CX3CL1P78423 397 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 FADDQ13158 208 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 KPNB1Q14974 876 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 ANKDD1AQ495B1 522 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 ZNF343Q6P1L6 599 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 CD200R1LQ6Q8B3 271 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 TBPL2Q6SJ96 375 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 MOB3CQ70IA8 216 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 NRMQ8IXM6 262 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 OR5A2Q8NGI9 324 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 OR4A5Q8NH83 315 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 RTN4IP1Q8WWV3 396 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 COQ2Q96H96 371 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 NMNAT3Q96T66 252 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 AMELYQ99218 206 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 JAM3Q9BX67 310 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 YTHDF1Q9BYJ9 559 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 BARHL1Q9BZE3 327 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 PPIL3Q9H2H8 161 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 CENPMQ9NSP4 180 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 DNAJC27Q9NZQ0 273 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 PEF1Q9UBV8 284 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 COPS3Q9UNS2 423 aa4.77□□□□□ -1.65
CTNNA1-216ENST00000519489 TRGV10A0A0A0MS01 117 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 PQLC2LA1A4F0 135 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 MGST3O14880 152 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 SERPINB7O75635 380 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 ANP32DO95626 131 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 HAND1O96004 215 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 CALCBP10092 127 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 PYCR1P32322 319 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 PTGFRP43088 359 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 CAV1Q03135 178 aa4.76□□□□□ -1.65
CTNNA1-216ENST00000519489 ZNF91Q05481 1191 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms