RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ZNF696Q9H7X3 374 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 BEX1Q9HBH7 125 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 HMG20AQ9NP66 347 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 INPP5EQ9NRR6 644 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 RBFOX1Q9NWB1 397 aaKnown RBP7.6□□□□□ -1.19
HDAC3-215ENST00000519474 SIRT4Q9Y6E7 314 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-215ENST00000519474 TRBV2A0A0J9YWF9 115 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 A0A1W2PPH5 198 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 MEX3AA1L020 520 aaKnown RBP7.59□□□□□ -1.19
HDAC3-215ENST00000519474 XKRY2A2RUG3 117 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 MEGF11A6BM72 1044 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 TOR1AO14656 332 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 KDM4BO94953 1096 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 HAND1O96004 215 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 DHFRP00374 187 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF728P0DKX0 622 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 PIPP12273 146 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-215ENST00000519474 DCKP27707 260 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 TALDO1P37837 337 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 RAG2P55895 527 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 MEF2CQ06413 473 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-215ENST00000519474 HABP2Q14520 560 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-215ENST00000519474 LDLRAD2Q5SZI1 272 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 OR2G6Q5TZ20 316 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 TTC23Q5W5X9 447 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 ASPHD2Q6ICH7 369 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 LAIR2Q6ISS4 152 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 GDPD3Q7L5L3 318 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 LHFPL4Q7Z7J7 247 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 Q8IYB0 196 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 SAXO1Q8IYX7 474 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 DHRSXQ8N5I4 330 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 TPRX1Q8N7U7 411 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 ASCC1Q8N9N2 400 aaKnown RBP7.59□□□□□ -1.19
HDAC3-215ENST00000519474 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-215ENST00000519474 OR13C9Q8NGT0 318 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 OR5AK2Q8NH90 309 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 CNIH3Q8TBE1 160 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 RPS4Y2Q8TD47 263 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 GGHQ92820 318 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 SPSB1Q96BD6 273 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 SSX3Q99909 188 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 C16orf95Q9H693 158 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 BABAM2Q9NXR7 383 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 CLEC2DQ9UHP7 191 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 RNF114Q9Y508 228 aa7.59□□□□□ -1.19
HDAC3-215ENST00000519474 A0A0G2JK05 382 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 hCG_1809904A0A1W2PP81 198 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 A0A1W2PPE2 198 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 A0A1W2PR64 198 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 A0A1W2PRV1 198 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 TMEM212A6NML5 194 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 SH2D1BO14796 132 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 MMP23AO75900 390 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 CLPXO76031 633 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 CYB5AP00167 134 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 PEX2P28328 305 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 ERP29P30040 261 aaKnown RBP7.58□□□□□ -1.2
HDAC3-215ENST00000519474 TGFBR2P37173 567 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 BMXP51813 675 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 EDDM3BP56851 147 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 ZP1P60852 638 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 CDK5R1Q15078 307 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 KISS1Q15726 138 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 YIF1BQ5BJH7 314 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 PRR31Q5SQ13 230 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 SLC35E4Q6ICL7 350 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 ZNF529Q6P280 563 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 Q6P435 159 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 RPL22L1Q6P5R6 122 aaKnown RBP7.58□□□□□ -1.2
HDAC3-215ENST00000519474 ZNF782Q6ZMW2 699 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-215ENST00000519474 ETV3LQ6ZN32 361 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 GDPGP1Q6ZNW5 385 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 TCF23Q7RTU1 214 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 DYNAPQ8N1N2 210 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 PACRGLQ8N7B6 248 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 ZNF485Q8NCK3 441 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 GRPEL2Q8TAA5 225 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 PPP1R35Q8TAP8 253 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 RGP1Q92546 391 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-215ENST00000519474 STMN2Q93045 179 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 CHST6Q9GZX3 395 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 GSTK1Q9Y2Q3 226 aa7.58□□□□□ -1.2
HDAC3-215ENST00000519474 A0A087X0M5 115 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 A0A1B0GX30 115 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 MGST3O14880 152 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 OR2H2O95918 312 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 LALBAP00709 142 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 IGHV1-8P0DP01 117 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 TMEM225BP0DP42 221 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 GABRR1P24046 479 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 COX7A1P24310 79 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 OR3A1P47881 315 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 SOX2P48431 317 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 RAB13P51153 203 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 SNU13P55769 128 aaKnown RBP7.57□□□□□ -1.2
HDAC3-215ENST00000519474 PROK1P58294 105 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 IL18R1Q13478 541 aa7.57□□□□□ -1.2
HDAC3-215ENST00000519474 GRK1Q15835 563 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms