RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	NPFFR1	Q9GZQ6	430 aa		19.6	■□□□□ 0.73
CNOT7-204	ENST00000518885	FKBP14	Q9NWM8	211 aa		19.6	■□□□□ 0.73
CNOT7-204	ENST00000518885	NKX1-2	Q9UD57	310 aa	Predicted RBP	19.6	■□□□□ 0.73
CNOT7-204	ENST00000518885	FOXJ3	Q9UPW0	622 aa		19.6	■□□□□ 0.73
CNOT7-204	ENST00000518885	ST3GAL6	Q9Y274	331 aa		19.6	■□□□□ 0.73
CNOT7-204	ENST00000518885	TIMM23	O14925	209 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	CDK1	P06493	297 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	IGFBP3	P17936	291 aa	Predicted RBP	19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	CDK2	P24941	298 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	HTR1D	P28221	377 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	GABRA5	P31644	462 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	SSX2	Q16385	188 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	LAIR2	Q6ISS4	152 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	OR13C5	Q8NGS8	318 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	OR14A2	Q96R54	314 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	TPRKB	Q9Y3C4	175 aa		19.59	■□□□□ 0.73
CNOT7-204	ENST00000518885	PNMA8C	A0A1B0GUJ8	204 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885		H0YHG0	523 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	GTF2F2	P13984	249 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	CEACAM3	P40198	252 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	HSPA13	P48723	471 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	DYNLT3	P51808	116 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	RPS11	P62280	158 aa	Known RBP eCLIP	19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	DOC2B	Q14184	412 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	C6orf141	Q5SZD1	244 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	ABHD12	Q8N2K0	398 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	MS4A15	Q8N5U1	240 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	OR10K1	Q8NGX5	313 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	IFT22	Q9H7X7	185 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	ING3	Q9NXR8	418 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	FBLN5	Q9UBX5	448 aa		19.58	■□□□□ 0.72
CNOT7-204	ENST00000518885	MEIKIN	A0A087WXM9	373 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	TRBV5-7	A0A0A0MS05	114 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	PTGES3L	E9PB15	166 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	F2RL2	O00254	374 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	HSPB6	O14558	160 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	TOR1A	O14656	332 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	CDRT1	O95170	752 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	PRRX1	P54821	245 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	AQP4	P55087	323 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	RBM11	P57052	281 aa	Known RBP	19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	PROK1	P58294	105 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	PAX5	Q02548	391 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	MPV17L	Q2QL34	196 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	PIGY	Q3MUY2	71 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	PRAMEF5	Q5TYX0	476 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	JAGN1	Q8N5M9	183 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	NKAIN3	Q8N8D7	197 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	OR2T6	Q8NHC8	308 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	MRPS24	Q96EL2	167 aa	Known RBP	19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	COQ2	Q96H96	371 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	CITED1	Q99966	193 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	SPACA1	Q9HBV2	294 aa		19.57	■□□□□ 0.72
CNOT7-204	ENST00000518885	KBTBD11-OT1	A0A1B0GTJ5	212 aa		19.56	■□□□□ 0.72
CNOT7-204	ENST00000518885		M0QZ24	198 aa		19.56	■□□□□ 0.72
CNOT7-204	ENST00000518885	OR7C1	O76099	320 aa	Predicted RBP	19.56	■□□□□ 0.72
CNOT7-204	ENST00000518885	SERPINA2	P20848	420 aa		19.56	■□□□□ 0.72
CNOT7-204	ENST00000518885	SLC35E4	Q6ICL7	350 aa		19.56	■□□□□ 0.72
CNOT7-204	ENST00000518885	TCF7L1	Q9HCS4	588 aa		19.56	■□□□□ 0.72
CNOT7-204	ENST00000518885	TCF19	Q9Y242	345 aa		19.56	■□□□□ 0.72
CNOT7-204	ENST00000518885	DSCAML1	Q8TD84	2053 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	TRAV24	A0A0B4J272	114 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	MEGF11	A6BM72	1044 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	CD34	P28906	385 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	GLP1R	P43220	463 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	KIR2DS4	P43632	304 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	SLC22A6	Q4U2R8	563 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	PLA1A	Q53H76	456 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	DERL3	Q96Q80	235 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	DPCD	Q9BVM2	203 aa	Predicted RBP	19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	DPM3	Q9P2X0	92 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	KIF25	Q9UIL4	384 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	MRPS28	Q9Y2Q9	187 aa	Known RBP	19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	HILPDA	Q9Y5L2	63 aa		19.55	■□□□□ 0.72
CNOT7-204	ENST00000518885	TRAV8-7	A0A075B6U6	113 aa		19.54	■□□□□ 0.72
CNOT7-204	ENST00000518885	ERICH4	A6NGS2	130 aa		19.54	■□□□□ 0.72
CNOT7-204	ENST00000518885	LEUTX	A8MZ59	168 aa		19.54	■□□□□ 0.72
CNOT7-204	ENST00000518885	BRS3	P32247	399 aa		19.54	■□□□□ 0.72
CNOT7-204	ENST00000518885	SPHAR	Q15513	63 aa		19.54	■□□□□ 0.72
CNOT7-204	ENST00000518885	SUMF2	Q8NBJ7	301 aa		19.54	■□□□□ 0.72
CNOT7-204	ENST00000518885	PPIL3	Q9H2H8	161 aa	Known RBP	19.54	■□□□□ 0.72
CNOT7-204	ENST00000518885	MYF6	P23409	242 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	PAX6	P26367	422 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	CCDC144NL	Q6NUI1	221 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	OR10A7	Q8NGE5	316 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	PIFO	Q8TCI5	191 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	NRG4	Q8WWG1	115 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	ORAI1	Q96D31	301 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	UQCC2	Q9BRT2	126 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	ANKRD60	Q9BZ19	345 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	CALY	Q9NYX4	217 aa		19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	19.53	■□□□□ 0.72
CNOT7-204	ENST00000518885		A0A087X0M5	115 aa		19.52	■□□□□ 0.72
CNOT7-204	ENST00000518885		A0A1B0GX30	115 aa		19.52	■□□□□ 0.72
CNOT7-204	ENST00000518885		A0A1W2PPK0	400 aa		19.52	■□□□□ 0.72
CNOT7-204	ENST00000518885	TMEM30CP	A0ZSE6	113 aa		19.52	■□□□□ 0.72
CNOT7-204	ENST00000518885	GEMIN2	O14893	280 aa	Known RBP	19.52	■□□□□ 0.72
CNOT7-204	ENST00000518885	MMP23A	O75900	390 aa		19.52	■□□□□ 0.72
CNOT7-204	ENST00000518885	MAS1	P04201	325 aa		19.52	■□□□□ 0.72
CNOT7-204	ENST00000518885	GZMH	P20718	246 aa		19.52	■□□□□ 0.72

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms