RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 N4BP2L1Q5TBK1 243 aaPredicted RBP1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 ELP2Q6IA86 826 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 SLC35D2Q76EJ3 337 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 GAPTQ8N292 157 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 C2orf73Q8N5S3 287 aaPredicted RBP1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 BLNKQ8WV28 456 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 DDIT4LQ96D03 193 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 CPB2Q96IY4 423 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 OR52B2Q96RD2 323 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 RPUSD1Q9UJJ7 312 aaKnown RBP1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 PHLDA3Q9Y5J5 127 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 OR51B4Q9Y5P0 310 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 MYO9AB2RTY4 2548 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 JMJD1CQ15652 2540 aa1.07□□□□□ -2.24
SCARNA1-201ENST00000517138 RGS12O14924 1447 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 TNRC18O15417 2968 aaPredicted RBP1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 IGHV1-45A0A0A0MS14 117 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 CD300LBA8K4G0 201 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 CENPXA8MT69 81 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 TCAPO15273 167 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 CECR9P0C854 216 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 IVDP26440 423 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 MAGEA3P43357 314 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 DYNC1I2Q13409 638 aaKnown RBP1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 ATP6V1FQ16864 119 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 DEFB119Q8N690 84 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 HIST1H2BAQ96A08 127 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 ZNF707Q96C28 371 aaPredicted RBP1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 OLFM3Q96PB7 478 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 FAM206AQ9NX38 181 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 SLC22A14Q9Y267 594 aa1.06□□□□□ -2.24
SCARNA1-201ENST00000517138 CEP164Q9UPV0 1460 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 ARHGEF11O15085 1522 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 CCDC88CQ9P219 2028 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 A0A0G2JQZ4 141 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 LOC102725191A0A1B0GVB3 256 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 A0A1B0GXF2 115 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 RBFOX3A6NFN3 312 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 UPK2O00526 184 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 GUSBP08236 651 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 LYNX1P0DP58 116 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 IL12BP29460 328 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 BNIP2Q12982 314 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 NDUFAF6Q330K2 333 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 ZCWPW2Q504Y3 356 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 DUPD1Q68J44 220 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 UGT2A3Q6UWM9 527 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 OTUD6AQ7L8S5 288 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 MUC15Q8N387 334 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 ZNF563Q8TA94 476 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 DCANP1Q8TF63 244 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 CACNG8Q8WXS5 425 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 CMBLQ96DG6 245 aa1.05□□□□□ -2.24
SCARNA1-201ENST00000517138 ZFHX4Q86UP3 3567 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 GPR98Q8WXG9 6306 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 KIAA1109Q2LD37 5005 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 LOC100653049A0A140TA62 436 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 KRT34O76011 436 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 ANGP03950 147 aaKnown RBP1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 ZNF7P17097 686 aaPredicted RBP1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 PRTN3P24158 256 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 HIKESHIQ53FT3 197 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 RBM45Q8IUH3 476 aaKnown RBP1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 TCAIMQ8N3R3 496 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 WDR55Q9H6Y2 383 aaPredicted RBP1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 AP3M1Q9Y2T2 418 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 TENM3Q9P273 2699 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 ATRNO75882 1429 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 CRB1P82279 1406 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 PXDNLA1KZ92 1463 aa1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 ASH1LQ9NR48 2969 aaKnown RBP1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 ANKHD1Q8IWZ3 2542 aaKnown RBP1.04□□□□□ -2.24
SCARNA1-201ENST00000517138 ZFHX2Q9C0A1 2572 aaPredicted RBP1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 LAMB4A4D0S4 1761 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 TRAV8-7A0A075B6U6 113 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 A0A0J9YX75 114 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 H3BP45 60 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 M0QXV9 152 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 TRAPPC3O43617 180 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 SOX14O95416 240 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 GYPCP04921 128 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 CPMP14384 443 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 CRABP1P29762 137 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 APOFQ13790 326 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 NXNL2Q5VZ03 156 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 Q6ZRN7 208 aaPredicted RBP1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 ATPAF2Q8N5M1 289 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 FER1L6-AS1Q8NA97 138 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 REEP6Q96HR9 211 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 CHID1Q9BWS9 393 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 KCNIP2Q9NS61 270 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 MINOS1-NBL1R4GNA1 71 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 NOTCH1P46531 2555 aa1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 POLR3AO14802 1390 aaPredicted RBP1.03□□□□□ -2.24
SCARNA1-201ENST00000517138 ATAD5Q96QE3 1844 aa1.03□□□□□ -2.25
SCARNA1-201ENST00000517138 C2CD3Q4AC94 2353 aa1.03□□□□□ -2.25
SCARNA1-201ENST00000517138 COL6A5A8TX70 2615 aa1.02□□□□□ -2.25
SCARNA1-201ENST00000517138 ALOX12BO75342 701 aa1.02□□□□□ -2.25
SCARNA1-201ENST00000517138 CLDN8P56748 225 aa1.02□□□□□ -2.25
SCARNA1-201ENST00000517138 TAS2R60P59551 318 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms