RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 POLR3AO14802 1390 aaPredicted RBP2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 IGHV1-45A0A0A0MS14 117 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 J3QRE1 110 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 TCF21O43680 179 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 PDYNP01213 254 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 IVLP07476 585 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 SLC2A1P11166 492 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 CRABP2P29373 138 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 GTF2H1P32780 548 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 FUSP35637 526 aaKnown RBP eCLIP2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 UBE2KP61086 200 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 TNNC1P63316 161 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 HBG1P69891 147 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 HBG2P69892 147 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 ZNF738Q8NE65 137 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 MSANTD3Q96H12 275 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 PITX2Q99697 317 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 IFT46Q9NQC8 304 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 ATRNO75882 1429 aa2.16□□□□□ -2.06
HMGCS1-207ENST00000514610 BRD4O60885 1362 aaPredicted RBP2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 DHX57Q6P158 1386 aaKnown RBP2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 IGHV2-26A0A0B4J1V2 119 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 A0A1B0GTI1 187 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 OR5H14A6NHG9 310 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 ZNF878C9JN71 531 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 PLPP3O14495 311 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 CDS2O95674 445 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 S100A9P06702 114 aaKnown RBP2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 MAGEA3P43357 314 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 RAB25P57735 213 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 VSNL1P62760 191 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 PRDX1Q06830 199 aaKnown RBP2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 TRIP13Q15645 432 aaPredicted RBP2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 GOLGA7BQ2TAP0 167 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 SSX6Q7RTT6 188 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 LYZL2Q7Z4W2 148 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 C10orf107Q8IVU9 208 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 OR2Y1Q8NGV0 311 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 RAD51AP1Q96B01 352 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 B9D2Q9BPU9 175 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 APOL4Q9BPW4 351 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 HAUS4Q9H6D7 363 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 MAT2BQ9NZL9 334 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 BTRCQ9Y297 605 aa2.15□□□□□ -2.07
HMGCS1-207ENST00000514610 SLC31A1O15431 190 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 POP7O75817 140 aaKnown RBP2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 CTSGP08311 255 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 ZNF22P17026 224 aaPredicted RBP2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 EVI2BP34910 448 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 AQP5P55064 265 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 CLEC20AQ6ZU45 233 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 HS3ST5Q8IZT8 346 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 REEP6Q96HR9 211 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 XKR8Q9H6D3 395 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 POFUT2Q9Y2G5 429 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 USH1CQ9Y6N9 552 aa2.14□□□□□ -2.07
HMGCS1-207ENST00000514610 PCNX2A6NKB5 2137 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 PSCAO43653 123 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 ZNF73O43830 326 aaPredicted RBP2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 CST4P01036 141 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 TSPAN5P62079 268 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 CD164Q04900 197 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 PSG3Q16557 428 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 AADACL4Q5VUY2 407 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 FAM19A3Q7Z5A8 133 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 SLC25A45Q8N413 288 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 OR4A5Q8NH83 315 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 CATSPER2Q96P56 530 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 HIGD2AQ9BW72 106 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 FBXL15Q9H469 300 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 AGPAT3Q9NRZ7 376 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 TAS2R13Q9NYV9 303 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 MRM2Q9UI43 246 aaKnown RBP2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 NAGKQ9UJ70 344 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 POMPQ9Y244 141 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 TBL2Q9Y4P3 447 aaKnown RBP2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 MMACHCQ9Y4U1 282 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 MYO16Q9Y6X6 1858 aa2.13□□□□□ -2.07
HMGCS1-207ENST00000514610 GPR75O95800 540 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 OPN1SWP03999 348 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 ZNF3P17036 446 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 RPA3P35244 121 aaPredicted RBP2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 COILP38432 576 aaPredicted RBP2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 LAMTOR1Q6IAA8 161 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 DGAT2L6Q6ZPD8 337 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 FAM183BPQ6ZVS7 135 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 AHSA2Q719I0 299 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 TRIML2Q8N7C3 387 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 OR10D4PQ8NGN7 298 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 TMEM239Q8WW34 195 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 CMBLQ96DG6 245 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 SNX24Q9Y343 169 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 LTBP2Q14767 1821 aa2.12□□□□□ -2.07
HMGCS1-207ENST00000514610 FBN1P35555 2871 aaKnown RBP2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 TRBV24-1A0A075B6N3 115 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 FAM183AA6NL82 134 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 C8orf87E5RJ46 101 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 TMEM250H0YL14 139 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 LECT2O14960 151 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 UBDO15205 165 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms