RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PXT1Q8NFP0 134 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 OR56B1Q8NGI3 324 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 OR4C16Q8NGL9 310 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 OR51F2Q8NH61 342 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 HPSE2Q8WWQ2 592 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 TMEM186Q96B77 213 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 MRPS24Q96EL2 167 aaKnown RBP6.95□□□□□ -1.3
CCL28-204ENST00000514421 NKX3-1Q99801 234 aaPredicted RBP6.95□□□□□ -1.3
CCL28-204ENST00000514421 OCSTAMPQ9BR26 566 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 TMEM59Q9BXS4 323 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 CST11Q9H112 138 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 OR51I2Q9H344 312 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 GPR173Q9NS66 373 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 HIF1ANQ9NWT6 349 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 ZNF221Q9UK13 617 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 SLC7A11Q9UPY5 501 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 CR1P17927 2039 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 ABCA2Q9BZC7 2435 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 IGKV1-27A0A075B6S5 117 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 OOEPA6NGQ2 149 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 CEACAM18A8MTB9 384 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 SNRPGP15A8MWD9 76 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 F5H0A9 414 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 C3orf80F5H4A9 247 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 TNFRSF13BO14836 293 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 SSX5O60225 188 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 CRLF1O75462 422 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 ZNF735P0CB33 412 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 MUC1P15941 1255 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 HIST1H1DP16402 221 aaKnown RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 ZNF16P17020 682 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 ZFP36P26651 326 aaKnown RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 FUT6P51993 359 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 TMEM50BP56557 158 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 RIPPLY3P57055 190 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 GUCA2AQ02747 115 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 MEF2DQ14814 521 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 MICBQ29980 383 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 CDNFQ49AH0 187 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 RNASE12Q5GAN4 147 aaKnown RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 PLAC9Q5JTB6 97 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 METTL11BQ5VVY1 283 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 TEX36Q5VZQ5 186 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 SFRP4Q6FHJ7 346 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 STEAP1BQ6NZ63 245 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 Q6ZTK2 550 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 SLC36A1Q7Z2H8 476 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 C1QL2Q7Z5L3 287 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 ZNF573Q86YE8 665 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 SAXO1Q8IYX7 474 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 ZSCAN4Q8NAM6 433 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 LRRC29Q8WV35 223 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 ST8SIA4Q92187 359 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 ZDHHC16Q969W1 377 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 NEIL1Q96FI4 390 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 Q96M66 194 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 SLC25A21Q9BQT8 299 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 URM1Q9BTM9 101 aaKnown RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 BEX2Q9BXY8 128 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 FGF23Q9GZV9 251 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 LPAR2Q9HBW0 351 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 MCUBQ9NWR8 336 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 HSF4Q9ULV5 492 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 KCNK7Q9Y2U2 307 aa6.94□□□□□ -1.3
CCL28-204ENST00000514421 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 NSD1Q96L73 2696 aaPredicted RBP6.94□□□□□ -1.3
CCL28-204ENST00000514421 TRAV6A0A075B6T7 132 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 PPIAL4CA0A0B4J2A2 164 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 PQLC2LA1A4F0 135 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 TMEM235A6NFC5 223 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 SERPINE3A8MV23 424 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 SRRM5B3KS81 715 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 ZNF780AO75290 641 aaPredicted RBP6.93□□□□□ -1.3
CCL28-204ENST00000514421 CYB5AP00167 134 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 C1QBP02746 253 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 CD3DP04234 171 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 ACAA1P09110 424 aaPredicted RBP6.93□□□□□ -1.3
CCL28-204ENST00000514421 SULT1A3P0DMM9 295 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 SULT1A4P0DMN0 295 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 GTF2F2P13984 249 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 RPS2P15880 293 aaKnown RBP6.93□□□□□ -1.3
CCL28-204ENST00000514421 MGMTP16455 207 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 CD80P33681 288 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 CBX5P45973 191 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 HAAOP46952 286 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 RBP2P50120 134 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 CR1LQ2VPA4 569 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 CHRFAM7AQ494W8 412 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 ESCO2Q56NI9 601 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 DMRTC1Q5HYR2 192 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 ATPAF1Q5TC12 328 aaPredicted RBP6.93□□□□□ -1.3
CCL28-204ENST00000514421 FAHD2BQ6P2I3 314 aaPredicted RBP6.93□□□□□ -1.3
CCL28-204ENST00000514421 HAGHLQ6PII5 290 aaPredicted RBP6.93□□□□□ -1.3
CCL28-204ENST00000514421 LYPD2Q6UXB3 125 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 GLDNQ6ZMI3 551 aaPredicted RBP6.93□□□□□ -1.3
CCL28-204ENST00000514421 NLRC3Q7RTR2 1065 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 ZBTB8BQ8NAP8 495 aaPredicted RBP6.93□□□□□ -1.3
CCL28-204ENST00000514421 OR8B3Q8NGG8 313 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 OR4D10Q8NGI6 311 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 GIMAP1Q8WWP7 306 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms