RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 IGHA2P01877 340 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 HLA-DRB1P01911 266 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 SP6Q3SY56 376 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 MED29Q9NX70 200 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 RCC2Q9P258 522 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 KLK8O60259 260 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 IGFBP6P24592 240 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 DUSP8Q13202 625 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 OR8I2Q8N0Y5 310 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 RPS4Y2Q8TD47 263 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 R3HDMLQ9H3Y0 253 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 SAP30LQ9HAJ7 183 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 A0A1W2PPC4 97 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 ASPDHA6ND91 283 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 TMEM262E9PQX1 116 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 F5H697 171 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 SLC25A17O43808 307 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 LEPROTL1O95214 131 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 HBZP02008 142 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 SEMG1P04279 462 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 SEC11BP0C7V7 166 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 GALP22466 123 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 KCNAB1Q14722 419 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 LRRC75AQ8NAA5 344 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 ST6GALNAC3Q8NDV1 305 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 OR2V2Q96R30 315 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 SLC17A5Q9NRA2 495 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 TMEM167BQ9NRX6 74 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 SLCO1C1Q9NYB5 712 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 JKAMPQ9P055 326 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 ATP23Q9Y6H3 246 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 CEP290O15078 2479 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 ARRDC5A6NEK1 342 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 C1QTNF9BB2RNN3 333 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 MUC1P15941 1255 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 RPS4Y1P22090 263 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 MMP16P51512 607 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 RTL8BQ17RB0 113 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 STPG1Q5TH74 334 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 METRNLQ641Q3 311 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 ZNF502Q8TBZ5 544 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 ROBO4Q8WZ75 1007 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 TAAR6Q96RI8 345 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 BCL2L10Q9HD36 194 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 TRIP11Q15643 1979 aa7.76□□□□□ -1.17
LIMCH1-218ENST00000513024 HYAL3O43820 417 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 LINC00614P0C842 121 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 OR1D5P58170 312 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 TNFRSF9Q07011 255 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 FBLN7Q53RD9 439 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 ADAMTSL4Q6UY14 1074 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 C16orf82Q7Z2V1 217 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 OR11H7Q8NGC8 314 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 CRISPLD2Q9H0B8 497 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 SCN1AP35498 2009 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 A0A1W2PNR3 127 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 UPK1AO00322 258 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 ALOX12BO75342 701 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 GNB2P62879 340 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 FUT7Q11130 342 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 ZNF345Q14585 488 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 JOSD1Q15040 202 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 TWIST1Q15672 202 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 DEGS2Q6QHC5 323 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 RTN4RL1Q86UN2 441 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 CALHM3Q86XJ0 350 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 OR10AD1Q8NGE0 317 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 TMPRSS13Q9BYE2 586 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 H3BMH7 237 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 ABHD3Q8WU67 409 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 HIST1H2BAQ96A08 127 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 MIEN1Q9BRT3 115 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 VN1R1Q9GZP7 353 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 TMEM30AQ9NV96 361 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 STARD10Q9Y365 291 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 M0R135 149 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 CYC1P08574 325 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 NAAAQ02083 359 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 EGR3Q06889 387 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 ZNF362Q5T0B9 420 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 MRPL30Q8TCC3 161 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 H1FXQ92522 213 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 TMEM230Q96A57 120 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 PIK3IP1Q96FE7 263 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 ZNF799Q96GE5 643 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 GNB4Q9HAV0 340 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 FGF22Q9HCT0 170 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 KIAA1456Q9P272 454 aa7.75□□□□□ -1.17
LIMCH1-218ENST00000513024 ZNF716A6NP11 495 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 P01737 135 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 TRGC1P0CF51 173 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 ARR3P36575 388 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 TNFSF10P50591 281 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 RELBQ01201 579 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 ABHD1Q96SE0 405 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 ZNF318Q5VUA4 2279 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 IGSF23A1L1A6 192 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 PRSS37A4D1T9 235 aa7.74□□□□□ -1.17
LIMCH1-218ENST00000513024 EIF4E2O60573 245 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms