RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 CEACAM21Q3KPI0 293 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 Q6ZT83 130 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 FA2HQ7L5A8 372 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 PDPNQ86YL7 162 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 SYT8Q8NBV8 401 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 OR5AP2Q8NGF4 316 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 OR10Z1Q8NGY1 313 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 OR10J6PQ8NGY7 276 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 GATA6Q92908 595 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 LINC00052Q96N35 136 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 DUSP21Q9H596 190 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 NAA60Q9H7X0 242 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 CITO14578 2027 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 SLC31A2O15432 143 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 CD3DP04234 171 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 OR2T10Q8NGZ9 312 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 OR9G1Q8NH87 305 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 MARC2Q969Z3 335 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ZNF385AQ96PM9 386 aaKnown RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 TIMP4Q99727 224 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ZNF426Q9BUY5 554 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 GPR27Q9NS67 375 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 VSIG4Q9Y279 399 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 A0A0G2JLM5 398 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 A0A0U1RQV5 110 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 PPP5D1E7EU14 171 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ATP6V1G2-DDX39BF2Z307 99 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 GDF9O60383 454 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 UPK3AO75631 287 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ORM2P19652 201 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 MPV17P39210 176 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 NUTF2P61970 127 aaKnown RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 PDZK1IP1Q13113 114 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ATP1A1-AS1Q5TC04 95 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 HSD17B13Q7Z5P4 300 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 UBALD1Q8TB05 177 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 RNF133Q8WVZ7 376 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 TMEM45BQ96B21 275 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 SPSB2Q99619 263 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 NPFFR1Q9GZQ6 430 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A10PA6NDY2 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A18PA6NE21 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A16PA6NEW6 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A20PA6NIJ5 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A8PA6NJQ4 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A7PA6NKC0 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ZNF729A6NN14 1252 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A22PA8MWA6 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A12PA8MX19 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A5PA8MXJ8 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A23PA8MXZ1 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 TRIM77I1YAP6 450 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A15PP0C7V4 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A13PP0C7W8 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A14PP0C7W9 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM90A24PP0C7X0 464 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 CD59P13987 128 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 MUC1P15941 1255 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 RPL13AP40429 203 aaKnown RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 CMC4P56277 68 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 FABP5Q01469 135 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 MESTQ5EB52 335 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 CLEC7AQ9BXN2 247 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 MAGT1Q9H0U3 335 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 CBLN4Q9NTU7 201 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 C20orf141Q9NUB4 165 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 UBE2L5PA0A1B0GUS4 154 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 CCSO14618 274 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 DXOO77932 396 aaKnown RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 SFT2D2O95562 160 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 IL18BPO95998 194 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 CTSDP07339 412 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 EVX1P49640 407 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 TNFSF10P50591 281 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 MFAP4P55083 255 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 H3F3AP84243 136 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 PSG4Q00888 419 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ROM1Q03395 351 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 RELQ04864 619 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 PDCD1Q15116 288 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ANKRD55Q3KP44 614 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 OTPQ5XKR4 325 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ZNF66Q6ZN08 573 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 OR1B1Q8NGR6 318 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 OR13C5Q8NGS8 318 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 SSC4DQ8WTU2 575 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 EEF1AKMT3Q96AZ1 226 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 TMEM186Q96B77 213 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ABHD14AQ9BUJ0 271 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 SLC25A22Q9H936 323 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ISG20L2Q9H9L3 353 aaKnown RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 HILPDAQ9Y5L2 63 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 AUP1Q9Y679 476 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 RGPD3A6NKT7 1758 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 AKAP11Q9UKA4 1901 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 A0A1W2PNV4 684 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 BMPR1BO00238 502 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 OR2J3O76001 311 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 CELA2AP08217 269 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 SNRPNP63162 240 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms