RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 CD200R1LQ6Q8B3 271 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 SLC16A12Q6ZSM3 486 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 ENTHD1Q8IYW4 607 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 RDH10Q8IZV5 341 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 PROKR2Q8NFJ6 384 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 OR8B12Q8NGG6 310 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 OR52B4Q8NGK2 314 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 OR52J3Q8NH60 311 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 RTN4IP1Q8WWV3 396 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-208ENST00000512813 CEP19Q96LK0 163 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 HRH4Q9H3N8 390 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 DCAF13Q9NV06 445 aaKnown RBP6.85□□□□□ -1.31
CLCN3-208ENST00000512813 PNPOQ9NVS9 261 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 CNOT2Q9NZN8 540 aaKnown RBP6.85□□□□□ -1.31
CLCN3-208ENST00000512813 IL36RNQ9UBH0 155 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 KLHDC2Q9Y2U9 406 aa6.85□□□□□ -1.31
CLCN3-208ENST00000512813 SMIM23A6NLE4 172 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 SPAG7O75391 227 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 NRASP01111 189 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 TRGV3P03979 118 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 OPRL1P41146 370 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 SLC1A6P48664 564 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 ACTBP60709 375 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 CDC42P60953 191 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 AESQ08117 197 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 ZNF660Q6AZW8 331 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-208ENST00000512813 FAHD1Q6P587 224 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 EIF1ADQ8N9N8 165 aaKnown RBP6.84□□□□□ -1.31
CLCN3-208ENST00000512813 ZNRF4Q8WWF5 429 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 DHRS1Q96LJ7 313 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 RARRES2Q99969 163 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 FNDC11Q9BVV2 318 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 OSBPL10Q9BXB5 764 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 LINC00574Q9H8X3 128 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 PPCSQ9HAB8 311 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 TECRQ9NZ01 308 aaKnown RBP6.84□□□□□ -1.31
CLCN3-208ENST00000512813 MTCH1Q9NZJ7 389 aa6.84□□□□□ -1.31
CLCN3-208ENST00000512813 C13orf42A0A1B0GVH6 325 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 TRPC5OSA6NMA1 111 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 ZNF593O00488 134 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-208ENST00000512813 CXCR6O00574 342 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 SHBGP04278 402 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 CSN2P05814 226 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 CGB3P0DN86 165 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 CGB7P0DN87 165 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 ATP6V1B1P15313 513 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 CD40LGP29965 261 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 FCGR2BP31994 310 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-208ENST00000512813 SLC18A1P54219 525 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 KRTAP10-2P60368 255 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 RIPPLY1Q0D2K3 151 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 RPEL1Q2QD12 228 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 ACTBL2Q562R1 376 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 DLEU7Q6UYE1 221 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 Q6ZSN1 163 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 ASRGL1Q7L266 308 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 FAM86B1Q8N7N1 296 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 OR2T4Q8NH00 348 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.83□□□□□ -1.32
CLCN3-208ENST00000512813 COQ2Q96H96 371 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 ANKRD60Q9BZ19 345 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 CALYQ9NYX4 217 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 IDI2-AS1Q9NZ38 188 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 NUBP2Q9Y5Y2 271 aa6.83□□□□□ -1.32
CLCN3-208ENST00000512813 A0A1W2PPE3 182 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 SIRPB1O00241 398 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 FFAR1O14842 300 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 UBDO15205 165 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 TXNL1O43396 289 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 IL1AP01583 271 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 EGR2P11161 476 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-208ENST00000512813 DUSP1P28562 367 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 MTPNP58546 118 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 PSMA6P60900 246 aaKnown RBP6.82□□□□□ -1.32
CLCN3-208ENST00000512813 TMEM267Q0VDI3 215 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-208ENST00000512813 BNIP1Q12981 228 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 KLF10Q13118 480 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 ZNF146Q15072 292 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 C5orf64Q2M2E5 130 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 VMACQ2NL98 169 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 ANKRD55Q3KP44 614 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 TM4SF20Q53R12 229 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 LIN54Q6MZP7 749 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 Q6ZTC4 211 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 RRM2BQ7LG56 351 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 TRPM8Q7Z2W7 1104 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 C5orf24Q7Z6I8 188 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 LINC00596Q86U02 117 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 FUNDC1Q8IVP5 155 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 UBE2DNLQ8IWF7 75 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 OR51L1Q8NGJ5 315 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 FANK1Q8TC84 345 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 EPS8L3Q8TE67 593 aaKnown RBP6.82□□□□□ -1.32
CLCN3-208ENST00000512813 SPDL1Q96EA4 605 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 C17orf77Q96MU5 243 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 NDUFAF3Q9BU61 184 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 ABHD6Q9BV23 337 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 TXLNGYQ9BZA5 131 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 KAT8Q9H7Z6 458 aaKnown RBP6.82□□□□□ -1.32
CLCN3-208ENST00000512813 PEF1Q9UBV8 284 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms