RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 FAM90A13PP0C7W8 464 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FAM90A14PP0C7W9 464 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FAM90A24PP0C7X0 464 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 GP2P55259 537 aaKnown RBP10.01□□□□□ -0.81
VEGFA-216ENST00000512683 RAB40BQ12829 278 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 SMN1Q16637 294 aaKnown RBP10.01□□□□□ -0.81
VEGFA-216ENST00000512683 HLA-DRB5Q30154 266 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 ABCA11PQ4W5N1 156 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 DEFB121Q5J5C9 76 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 TPTE2P1Q5T6R2 138 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 SLC16A12Q6ZSM3 486 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 COMMD1Q8N668 190 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 OR13C9Q8NGT0 318 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 CHPT1Q8WUD6 406 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 PDCD1LG2Q9BQ51 273 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 LINC00574Q9H8X3 128 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 TENM3Q9P273 2699 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 DNAH3Q8TD57 4116 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 ODAMA1E959 279 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 MMP23AO75900 390 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 OR2H2O95918 312 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 AMY1AP04745 511 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 AMY2AP04746 511 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 OCM2P0CE71 109 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 OCMP0CE72 109 aaPredicted RBP10□□□□□ -0.81
VEGFA-216ENST00000512683 LIMS3P0CW19 117 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 LIMS4P0CW20 117 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 PTGFRP43088 359 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 SNU13P55769 128 aaKnown RBP10□□□□□ -0.81
VEGFA-216ENST00000512683 TMEM95Q3KNT9 176 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 UNQ9370/PRO34162Q6UXP9 181 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 PARP16Q8N5Y8 322 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 LINC00482Q8N8I6 264 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 OR5D18Q8NGL1 313 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 OR9G1Q8NH87 305 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 MRPL48Q96GC5 212 aaKnown RBP10□□□□□ -0.81
VEGFA-216ENST00000512683 JAM3Q9BX67 310 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 ZCCHC4Q9H5U6 513 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 FGF20Q9NP95 211 aaPredicted RBP10□□□□□ -0.81
VEGFA-216ENST00000512683 GSTK1Q9Y2Q3 226 aa10□□□□□ -0.81
VEGFA-216ENST00000512683 RPL36Q9Y3U8 105 aaKnown RBP10□□□□□ -0.81
VEGFA-216ENST00000512683 AMMECR1Q9Y4X0 333 aaPredicted RBP10□□□□□ -0.81
VEGFA-216ENST00000512683 KBTBD11-OT1A0A1B0GTJ5 212 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 PSMB11A5LHX3 300 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 TMEM212A6NML5 194 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 SIRPB1O00241 398 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 DEGS1O15121 323 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 FGF16O43320 207 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 NHLRC4P0CG21 123 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-216ENST00000512683 JUNBP17275 347 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-216ENST00000512683 C21orf33P30042 268 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-216ENST00000512683 MYCNOSP40205 109 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 GTF2A1P52655 376 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-216ENST00000512683 ZP1P60852 638 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 PAX5Q02548 391 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 AESQ08117 197 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 CDK5R1Q15078 307 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 KISS1Q15726 138 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 KLHL22Q53GT1 634 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 KRBOX4Q5JUW0 171 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 LPCAT4Q643R3 524 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 XAF1Q6GPH4 301 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 ZNF529Q6P280 563 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 Q6P435 159 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 SERPINA12Q8IW75 414 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 OR10A7Q8NGE5 316 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 OR5AK2Q8NH90 309 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 HAVCR2Q8TDQ0 301 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 RGP1Q92546 391 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-216ENST00000512683 B9D2Q9BPU9 175 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 BARHL1Q9BZE3 327 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 MOB4Q9Y3A3 225 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 HSPE1-MOB4S4R3N1 261 aa9.99□□□□□ -0.81
VEGFA-216ENST00000512683 SULT1B1O43704 296 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 RAMP3O60896 148 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 BAG2O95816 211 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 CGB3P0DN86 165 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 CGB7P0DN87 165 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 ZNF44P15621 663 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 GLIPR1P48060 266 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 KCNJ3P48549 501 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 THBS3P49746 956 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 ETV1P50549 477 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 RAB7AP51149 207 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 GBX2P52951 348 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-216ENST00000512683 KRTAP10-11P60412 298 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 MRPL28Q13084 256 aaKnown RBP9.98□□□□□ -0.81
VEGFA-216ENST00000512683 PRAMEF5Q5TYX0 476 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 BAIAP2L2Q6UXY1 529 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 OR8H3Q8N146 312 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 OR5D14Q8NGL3 314 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 RPEQ96AT9 228 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 CPNE2Q96FN4 548 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-216ENST00000512683 WWC2-AS2Q96NR7 200 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 RDH12Q96NR8 316 aa9.98□□□□□ -0.81
VEGFA-216ENST00000512683 SMPD3Q9NY59 655 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-216ENST00000512683 WI2-2373I1.2A0A1W2PRP0 233 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 SLC33A1O00400 549 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-216ENST00000512683 HCKP08631 526 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 CCDC159P0C7I6 412 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms