RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 PPIL3Q9H2H8 161 aaKnown RBP12.96□□□□□ -0.33
DDX41-214ENST00000512334 GAL3ST2Q9H3Q3 398 aa12.96□□□□□ -0.33
DDX41-214ENST00000512334 FAM181BA6NEQ2 426 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 GEMIN2O14893 280 aaKnown RBP12.95□□□□□ -0.34
DDX41-214ENST00000512334 CPEP16870 476 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 GABARAPL2P60520 117 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 FOXL1Q12952 345 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 TRAM1Q15629 374 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 NHLRC3Q5JS37 347 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 ATAD3CQ5T2N8 411 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 GLT8D1Q68CQ7 371 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 LINC00596Q86U02 117 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 SUMF2Q8NBJ7 301 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 NEK7Q8TDX7 302 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 UQCC2Q9BRT2 126 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 DPCDQ9BVM2 203 aaPredicted RBP12.95□□□□□ -0.34
DDX41-214ENST00000512334 BARHL1Q9BZE3 327 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 OR6C3Q9NZP0 311 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 ZNF581Q9P0T4 197 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 SESN1Q9Y6P5 492 aa12.95□□□□□ -0.34
DDX41-214ENST00000512334 KIAA2026Q5HYC2 2103 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 MEIKINA0A087WXM9 373 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 SC5DO75845 299 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 MMP23AO75900 390 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 SRMP19623 302 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 CDK2P24941 298 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 PSMA1P25786 263 aaKnown RBP12.94□□□□□ -0.34
DDX41-214ENST00000512334 GLP1RP43220 463 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 COMPP49747 757 aaPredicted RBP12.94□□□□□ -0.34
DDX41-214ENST00000512334 GP2P55259 537 aaKnown RBP12.94□□□□□ -0.34
DDX41-214ENST00000512334 TAF9Q16594 264 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 MPV17LQ2QL34 196 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 AWAT1Q58HT5 328 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 LHFPL4Q7Z7J7 247 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 LRRTM1Q86UE6 522 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 SVOPQ8N4V2 548 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 BEND2Q8NDZ0 799 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 PHYHIPQ92561 330 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 CORO2AQ92828 525 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 FOXRED1Q96CU9 486 aaPredicted RBP12.94□□□□□ -0.34
DDX41-214ENST00000512334 BANF2Q9H503 90 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 ACOT13Q9NPJ3 140 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 TAS2R3Q9NYW6 316 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 KIF25Q9UIL4 384 aa12.94□□□□□ -0.34
DDX41-214ENST00000512334 IGHV2-26A0A0B4J1V2 119 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 HAX1O00165 279 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 CRTAPO75718 401 aaPredicted RBP12.93□□□□□ -0.34
DDX41-214ENST00000512334 UCHL1P09936 223 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 OMGP23515 440 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 PAX6P26367 422 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 KCNJ3P48549 501 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 BRICD5Q6PL45 260 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 TMEM91Q6ZNR0 172 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 LYPD6Q86Y78 171 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 C3orf56Q8N813 242 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 PLPPR1Q8TBJ4 325 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 DYRK2Q92630 601 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 FAM46BQ96A09 425 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 SELENOIQ9C0D9 397 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 TMEM133Q9H2Q1 129 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 IFT22Q9H7X7 185 aa12.93□□□□□ -0.34
DDX41-214ENST00000512334 FAM172BPA6NC97 362 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 ZNF729A6NN14 1252 aaPredicted RBP12.92□□□□□ -0.34
DDX41-214ENST00000512334 ODF3BA8MYP8 253 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 H3BUX3 64 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 GPR137BO60478 399 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 MRPS14O60783 128 aaKnown RBP12.92□□□□□ -0.34
DDX41-214ENST00000512334 ARL6IP5O75915 188 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 MGMTP16455 207 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 GABRA5P31644 462 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 EMX1Q04741 257 aaPredicted RBP12.92□□□□□ -0.34
DDX41-214ENST00000512334 PLA1AQ53H76 456 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 RSBN1Q5VWQ0 802 aaPredicted RBP12.92□□□□□ -0.34
DDX41-214ENST00000512334 ZNF626Q68DY1 528 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 OR52W1Q6IF63 320 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 BAIAP2L2Q6UXY1 529 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 HEPN1Q6WQI6 88 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 GDPGP1Q6ZNW5 385 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 ZNF565Q8N9K5 539 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 OR11H6Q8NGC7 330 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 OR5R1Q8NH85 324 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 NDNFQ8TB73 568 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 MRGPRDQ8TDS7 321 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 MRPS24Q96EL2 167 aaKnown RBP12.92□□□□□ -0.34
DDX41-214ENST00000512334 AJUBAQ96IF1 538 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 SSX3Q99909 188 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 CLEC7AQ9BXN2 247 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 YTHDF1Q9BYJ9 559 aaKnown RBP12.92□□□□□ -0.34
DDX41-214ENST00000512334 GHRLQ9UBU3 117 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 VPREB3Q9UKI3 123 aa12.92□□□□□ -0.34
DDX41-214ENST00000512334 TBL2Q9Y4P3 447 aaKnown RBP12.92□□□□□ -0.34
DDX41-214ENST00000512334 MPIG6BO95866 241 aa12.91□□□□□ -0.34
DDX41-214ENST00000512334 CALRP27797 417 aaKnown RBP12.91□□□□□ -0.34
DDX41-214ENST00000512334 FABP5Q01469 135 aa12.91□□□□□ -0.34
DDX41-214ENST00000512334 LRRC75BQ2VPJ9 315 aa12.91□□□□□ -0.34
DDX41-214ENST00000512334 ABHD12Q8N2K0 398 aa12.91□□□□□ -0.34
DDX41-214ENST00000512334 TMEM104Q8NE00 496 aa12.91□□□□□ -0.34
DDX41-214ENST00000512334 OR13A1Q8NGR1 328 aa12.91□□□□□ -0.34
DDX41-214ENST00000512334 CST11Q9H112 138 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms