RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TDGF1P3P51864 188 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 GP2P55259 537 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 GFERP55789 205 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 DLX6P56179 175 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 PIGPP57054 158 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 CDK5Q00535 292 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 EMX1Q04741 257 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 GNMTQ14749 295 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 QPRTQ15274 297 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 CHMP1BQ7LBR1 199 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 CMC1Q7Z7K0 106 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 KIR3DL3Q8N743 410 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 LRTM2Q8N967 370 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 DUSP18Q8NEJ0 188 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR8D4Q8NGM9 314 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 UBE2E3Q969T4 207 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 RPUSD4Q96CM3 377 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 REEP6Q96HR9 211 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 Q96MF0 132 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 FRG2BQ96QU4 278 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 GFM1Q96RP9 751 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 SYT3Q9BQG1 590 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 URM1Q9BTM9 101 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 SUCNR1Q9BXA5 334 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 MS4A6AQ9H2W1 248 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 TMPRSS5Q9H3S3 457 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF385DQ9H6B1 395 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 ACOT13Q9NPJ3 140 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 METTL1Q9UBP6 276 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 KLK13Q9UKR3 277 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 MGAQ8IWI9 3026 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 UNC13CQ8NB66 2214 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 KNTC1P50748 2209 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 A1L4Q6 167 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF732B4DXR9 585 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 C15orf65H3BRN8 121 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 ORC5O43913 435 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 RDH16O75452 317 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 CDS2O95674 445 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 LALBAP00709 142 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 APOC3P02656 99 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 FOLR2P14207 255 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF133P52736 654 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 PSG6Q00889 435 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 TGFBR3Q03167 851 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 BAXQ07812 192 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF155Q12901 538 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 MAD2L1Q13257 205 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 FASTKQ14296 549 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 RBMS2Q15434 407 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRSS8Q16651 343 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 LTC4SQ16873 150 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 DCST2Q5T1A1 773 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 STEAP4Q687X5 459 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 STEAP1BQ6NZ63 245 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 ACOT4Q8N9L9 421 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 BEST4Q8NFU0 473 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR8G5Q8NG78 346 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 GPR148Q8TDV2 347 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 LCN9Q8WX39 176 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 PEX11GQ96HA9 241 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR2M2Q96R28 347 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 GINS3Q9BRX5 216 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 MSL2Q9HCI7 577 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 A4GALTQ9NPC4 353 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 HRASLS2Q9NWW9 162 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 WSB1Q9Y6I7 421 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 PIKFYVEQ9Y2I7 2098 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF106Q9H2Y7 1883 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 IGHV1OR21-1A0A087WYE8 117 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 A0A0G2JK05 382 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 KIR2DS5A0A0G2JLQ3 304 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 A0A0G2JNG1 304 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 A0A1W2PRE2 83 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZC3H12DA2A288 527 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 B4DXG7 233 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 KIR2DS3K7RE56 304 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 PDCD5O14737 125 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 MYL12BO14950 172 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 CLIC3O95833 236 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 PAX1P15863 534 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 MYL12AP19105 171 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 HTR1EP28566 365 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 GLRXP35754 106 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 MNDAP41218 407 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 REG1BP48304 166 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 RIPPLY3P57055 190 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 RPS20P60866 119 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 RHOBP62745 196 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 GGTLC2Q14390 218 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 KIR2DS3Q14952 304 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 KIR2DS5Q14953 304 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 FAM74A1Q5RGS3 127 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 HBMQ6B0K9 141 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF613Q6PF04 617 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 MRGPRGQ86SM5 289 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 IFNEQ86WN2 208 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR52E4Q8NGH9 312 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR4D11Q8NGI4 311 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms