RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 NKAIN3Q8N8D7 197 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 SUMF2Q8NBJ7 301 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 DPCDQ9BVM2 203 aaPredicted RBP11.37□□□□□ -0.59
DDX41-212ENST00000511040 ISYNA1Q9NPH2 558 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 ACOT13Q9NPJ3 140 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 ZNRD1Q9P1U0 126 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 KIF25Q9UIL4 384 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 UBE2J1Q9Y385 318 aaPredicted RBP11.37□□□□□ -0.59
DDX41-212ENST00000511040 SESN1Q9Y6P5 492 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 MEIKINA0A087WXM9 373 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 MEGF11A6BM72 1044 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 FAM172BPA6NC97 362 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 SC5DO75845 299 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 CLPXO76031 633 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 RBP4P02753 201 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 CSN2P05814 226 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 UCHL1P09936 223 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 HKR1P10072 659 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 GTF2F2P13984 249 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 GDNFP39905 211 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 GLP1RP43220 463 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 LGALS4P56470 323 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 GABARAPL2P60520 117 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 FABP5Q01469 135 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 PLA1AQ53H76 456 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 NHLRC3Q5JS37 347 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 ATAD3CQ5T2N8 411 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 LHFPL4Q7Z7J7 247 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 CDH26Q8IXH8 852 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 TMEM104Q8NE00 496 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 OR13D1Q8NGV5 346 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 PLPPR1Q8TBJ4 325 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 PHYHIPQ92561 330 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 FAM46BQ96A09 425 aa11.36□□□□□ -0.59
DDX41-212ENST00000511040 GPR137BO60478 399 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 ZNF780AO75290 641 aaPredicted RBP11.35□□□□□ -0.59
DDX41-212ENST00000511040 CRTAPO75718 401 aaPredicted RBP11.35□□□□□ -0.59
DDX41-212ENST00000511040 SRMP19623 302 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 CDK2P24941 298 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 EMX1Q04741 257 aaPredicted RBP11.35□□□□□ -0.59
DDX41-212ENST00000511040 GPR176Q14439 515 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 SSX1Q16384 188 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 AWAT1Q58HT5 328 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 DYNAPQ8N1N2 210 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 TMEM86BQ8N661 226 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 OR13A1Q8NGR1 328 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 NEK7Q8TDX7 302 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 CORO2AQ92828 525 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 CYYR1Q96J86 154 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 UQCC2Q9BRT2 126 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 SELENOIQ9C0D9 397 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 DPAGT1Q9H3H5 408 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 GAL3ST2Q9H3Q3 398 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 KCNK15Q9H427 330 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 PCDHB16Q9NRJ7 776 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 POMT1Q9Y6A1 747 aa11.35□□□□□ -0.59
DDX41-212ENST00000511040 IGHV2-26A0A0B4J1V2 119 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 BTBD17A6NE02 478 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 ODF3BA8MYP8 253 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 CRYBA1P05813 215 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 MGMTP16455 207 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 TRAM1Q15629 374 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 C17orf58Q2M2W7 97 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 MPV17LQ2QL34 196 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 LDLRAD2Q5SZI1 272 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 UTF1Q5T230 341 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 RSBN1Q5VWQ0 802 aaPredicted RBP11.34□□□□□ -0.59
DDX41-212ENST00000511040 GLT8D1Q68CQ7 371 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 OR10K2Q6IF99 312 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 LINC00596Q86U02 117 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 SPARTQ8N0X7 666 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 BEND2Q8NDZ0 799 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 OR11H6Q8NGC7 330 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 MRGPRDQ8TDS7 321 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 FOXRED1Q96CU9 486 aaPredicted RBP11.34□□□□□ -0.59
DDX41-212ENST00000511040 SSX3Q99909 188 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 BARHL1Q9BZE3 327 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 SLITRK2Q9H156 845 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 TMEM133Q9H2Q1 129 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 IFT22Q9H7X7 185 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 TAS2R3Q9NYW6 316 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 OR6C3Q9NZP0 311 aa11.34□□□□□ -0.59
DDX41-212ENST00000511040 AK6Q9Y3D8 172 aaKnown RBP11.34□□□□□ -0.59
DDX41-212ENST00000511040 STAB1Q9NY15 2570 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 H3BUX3 64 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 MPIG6BO95866 241 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 NFYBP25208 207 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 PSMA1P25786 263 aaKnown RBP11.33□□□□□ -0.6
DDX41-212ENST00000511040 CALRP27797 417 aaKnown RBP11.33□□□□□ -0.6
DDX41-212ENST00000511040 GABRA5P31644 462 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 COMPP49747 757 aaPredicted RBP11.33□□□□□ -0.6
DDX41-212ENST00000511040 P2RY14Q15391 338 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 LY6EQ16553 131 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 LTC4SQ16873 150 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 C1orf100Q5SVJ3 147 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 ZNF626Q68DY1 528 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 HEPN1Q6WQI6 88 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 SVOPQ8N4V2 548 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 C3orf56Q8N813 242 aa11.33□□□□□ -0.6
DDX41-212ENST00000511040 CCDC107Q8WV48 283 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms