RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 NTNG2Q96CW9 530 aa12.96□□□□□ -0.33
USP38-202ENST00000510377 OR51M1Q9H341 326 aa12.96□□□□□ -0.33
USP38-202ENST00000510377 DOK5Q9P104 306 aa12.96□□□□□ -0.33
USP38-202ENST00000510377 TGIF2-C20orf24A0A0A6YYL0 155 aa12.96□□□□□ -0.33
USP38-202ENST00000510377 DANCRP0C864 163 aa12.96□□□□□ -0.33
USP38-202ENST00000510377 HOXC12P31275 282 aa12.96□□□□□ -0.33
USP38-202ENST00000510377 HLA-DRB3P79483 266 aa12.96□□□□□ -0.33
USP38-202ENST00000510377 OR10AD1Q8NGE0 317 aa12.96□□□□□ -0.34
USP38-202ENST00000510377 CACNG5Q9UF02 275 aa12.96□□□□□ -0.34
USP38-202ENST00000510377 STARD10Q9Y365 291 aa12.96□□□□□ -0.34
USP38-202ENST00000510377 SHANK1Q9Y566 2161 aa12.96□□□□□ -0.34
USP38-202ENST00000510377 DEGS1O15121 323 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 TIAF1O95411 115 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 IGHMP01871 453 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 CLDN15P56746 228 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 NCR3LG1Q68D85 454 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 TMEM252Q8N6L7 170 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 A0A1W2PPV4 95 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 CLDN34H7C241 214 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 ATXN7O15265 892 aaPredicted RBP12.95□□□□□ -0.34
USP38-202ENST00000510377 PRF1P14222 555 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 RND3P61587 244 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 PATZ1Q9HBE1 687 aaKnown RBP12.95□□□□□ -0.34
USP38-202ENST00000510377 WIPF3A6NGB9 483 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 GRPP07492 148 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 PSMB3P49720 205 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 ERVS71-1P61550 626 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 ZNF66Q6ZN08 573 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 LINC00696Q6ZRV3 163 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 PLPPR2Q96GM1 343 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 RSG1Q9BU20 258 aa12.95□□□□□ -0.34
USP38-202ENST00000510377 ARF1P84077 181 aaKnown RBP12.94□□□□□ -0.34
USP38-202ENST00000510377 ABHD17BQ5VST6 288 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 OR1K1Q8NGR3 316 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 B4GALT7Q9UBV7 327 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 OR6C6A6NF89 314 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 LINC01387J3KSC0 135 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 LTBRP36941 435 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 MST1LQ2TV78 715 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 DNM1P46Q6ZS02 220 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 ZNF837Q96EG3 531 aaPredicted RBP12.94□□□□□ -0.34
USP38-202ENST00000510377 HTTP42858 3142 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 NXPH2O95156 264 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 KRASP01116 189 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 UBE2G2P60604 165 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 FIP1L1Q6UN15 594 aaKnown RBP12.94□□□□□ -0.34
USP38-202ENST00000510377 C1orf210Q8IVY1 113 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 MRGPRFQ96AM1 343 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 POM121Q96HA1 1249 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 GGACTQ9BVM4 153 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 AKIRIN1Q9H9L7 192 aaPredicted RBP12.94□□□□□ -0.34
USP38-202ENST00000510377 TMEM100Q9NV29 134 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 B3GAT1Q9P2W7 334 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 BTBD17A6NE02 478 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 SEC14L6B5MCN3 397 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 PDGFBP01127 241 aaPredicted RBP12.94□□□□□ -0.34
USP38-202ENST00000510377 FKBP2P26885 142 aaKnown RBP12.94□□□□□ -0.34
USP38-202ENST00000510377 DSCR4P56555 118 aaPredicted RBP12.94□□□□□ -0.34
USP38-202ENST00000510377 KMT5CQ86Y97 462 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 TP53RKQ96S44 253 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 SLC25A22Q9H936 323 aa12.94□□□□□ -0.34
USP38-202ENST00000510377 A0A0J9YW62 118 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 TMEM187Q14656 261 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 SPINK9Q5DT21 86 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 OR13D1Q8NGV5 346 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 ZNF488Q96MN9 340 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 OCIAD1Q9NX40 245 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 A0A087X0M5 115 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 A0A1B0GX30 115 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 CLEC18AA5D8T8 446 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 EFNA2O43921 213 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 SCTP09683 121 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 HLA-BQ31612 363 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 CLEC18CQ8NCF0 446 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 Q96M66 194 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 ZNF665Q9H7R5 613 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 AURKAIP1Q9NWT8 199 aaPredicted RBP12.93□□□□□ -0.34
USP38-202ENST00000510377 ZNF581Q9P0T4 197 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 LRP11Q86VZ4 500 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 ZDHHC23Q8IYP9 409 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 CDH20Q9HBT6 801 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 GPR27Q9NS67 375 aa12.93□□□□□ -0.34
USP38-202ENST00000510377 KIAA2026Q5HYC2 2103 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 M0R296 226 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 CBR3O75828 277 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 CD63P08962 238 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 BCL3P20749 454 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 CSRP1P21291 193 aaKnown RBP12.92□□□□□ -0.34
USP38-202ENST00000510377 ZNF92Q03936 586 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 PRDX4Q13162 271 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 ZNF705AQ6ZN79 300 aaPredicted RBP12.92□□□□□ -0.34
USP38-202ENST00000510377 ADGRG7Q96K78 797 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 WFDC1Q9HC57 220 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 METTL1Q9UBP6 276 aaKnown RBP12.92□□□□□ -0.34
USP38-202ENST00000510377 C5orf42Q9H799 3197 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 TRBV6-7A0A0A0MS04 114 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 MAP1LC3B2A6NCE7 125 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms