RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 MBNL2Q5VZF2 373 aaKnown RBP4.4□□□□□ -1.71
PHF3-210ENST00000509876 ELP2Q6IA86 826 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 NCCRP1Q6ZVX7 275 aaPredicted RBP4.4□□□□□ -1.71
PHF3-210ENST00000509876 TAF9BQ9HBM6 251 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 ST6GALNAC2Q9UJ37 374 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 A0A1W2PN81 502 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 ANXA7P20073 488 aaKnown RBP4.4□□□□□ -1.71
PHF3-210ENST00000509876 CHRNA7P36544 502 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 PPOXP50336 477 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 IL24Q13007 206 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 TNXAQ16473 311 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 TMEM268Q5VZI3 342 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 RTN4RL2Q86UN3 420 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 PINX1Q96BK5 328 aaKnown RBP4.4□□□□□ -1.71
PHF3-210ENST00000509876 GRAMD2BQ96HH9 432 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 ABHD14AQ9BUJ0 271 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 MMP28Q9H239 520 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 C7orf69Q9H7B7 122 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 MEX3AA1L020 520 aaKnown RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 ZNF729A6NN14 1252 aaPredicted RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 K7EPK0 472 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 HAX1O00165 279 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 NDUFS8O00217 210 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 NXPH3O95157 252 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 OMGP23515 440 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 ERVS71-1P61550 626 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 SNRPNP63162 240 aaKnown RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 IAH1Q2TAA2 248 aaPredicted RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 FAM166AQ6J272 317 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 SLC25A42Q86VD7 318 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 FAM71E2Q8N5Q1 922 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 ZBTB34Q8NCN2 500 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 OR10AC1Q8NH08 325 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 DEDD2Q8WXF8 326 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 MOB3AQ96BX8 217 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 FLYWCH2Q96CP2 140 aaKnown RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 SOX7Q9BT81 388 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 MRPL13Q9BYD1 178 aaKnown RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 SEBOXQ9HB31 216 aaPredicted RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 TMEM11P17152 192 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 ADRA2CP18825 462 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 HTR1DP28221 377 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 NKX2-1P43699 371 aaPredicted RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 BPIFB3P59826 476 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 ARF6P62330 175 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 CLEC7AQ9BXN2 247 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 ZNF230Q9UIE0 474 aaPredicted RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 EFNA2O43921 213 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 DTYMKP23919 212 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 CRYBB2P43320 205 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 UQCRFS1P47985 274 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 DGCR2P98153 550 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 Q6ZRG5 221 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 OR4S1Q8NGB4 309 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 RTN4IP1Q8WWV3 396 aaPredicted RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 G6PC2Q9NQR9 355 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 RBMX2Q9Y388 322 aaKnown RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 PCM1Q15154 2024 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 RAB29O14966 203 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 LANCL1O43813 399 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 KLK2P20151 261 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 LPAR6P43657 344 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 RAP2BP61225 183 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 C3orf36Q3SXR2 165 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 SPAG16Q8N0X2 631 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 ZIC4Q8N9L1 334 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 V9GYS6 101 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 KNTC1P50748 2209 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 hCG_38984A0A1B0GV85 526 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 SYNGR1O43759 233 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 DFFBO76075 338 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 CD3DP04234 171 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 MC5RP33032 325 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 LILRB1Q8NHL6 650 aaPredicted RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 BORCS7Q96B45 105 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 AMELYQ99218 206 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 HSD17B10Q99714 261 aaKnown RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 SPRY4Q9C004 299 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 HILPDAQ9Y5L2 63 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 A0A1W2PNU3 283 aaPredicted RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 PDGFAP04085 211 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 TCRBP04435 133 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 SMIM18P0DKX4 95 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 SULT1A3P0DMM9 295 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 SULT1A4P0DMN0 295 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 ACKR3P25106 362 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 EVX1P49640 407 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 MMP15P51511 669 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 PSG7Q13046 419 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 MMDQ15546 238 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 FAM76BQ5HYJ3 339 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 FAM74A1Q5RGS3 127 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 ZNF474Q6S9Z5 364 aaPredicted RBP4.39□□□□□ -1.71
PHF3-210ENST00000509876 OR8H3Q8N146 312 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 CELF2-AS1Q8N7Q2 184 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 RPS4Y2Q8TD47 263 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 PTX4Q96A99 478 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 ARL6Q9H0F7 186 aa4.39□□□□□ -1.71
PHF3-210ENST00000509876 BEX4Q9NWD9 120 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms