RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 IFITM2Q01629 132 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 MZT1Q08AG7 82 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 ZNF154Q13106 437 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 SURF2Q15527 256 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-226ENST00000508740 MSMPQ1L6U9 139 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-226ENST00000508740 ZNF660Q6AZW8 331 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-226ENST00000508740 LAMTOR1Q6IAA8 161 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 Q6ZR03 302 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 Q6ZS49 121 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 SSX8Q7RTT4 187 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 LRP11Q86VZ4 500 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 SUMF2Q8NBJ7 301 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 RELL2Q8NC24 303 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-226ENST00000508740 GALNT11Q8NCW6 608 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 OR11H4Q8NGC9 324 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 OR2T35Q8NGX2 323 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 MITD1Q8WV92 249 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 ASB13Q8WXK3 278 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 GTF3AQ92664 365 aaKnown RBP6.74□□□□□ -1.33
NR1I3-226ENST00000508740 RND1Q92730 232 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 DMRTA2Q96SC8 542 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 DHRS9Q9BPW9 319 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 VKORC1Q9BQB6 163 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 ZNF2Q9BSG1 426 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-226ENST00000508740 RTBDNQ9BSG5 229 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-226ENST00000508740 DPCDQ9BVM2 203 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-226ENST00000508740 TLNRD1Q9H1K6 362 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 MSL2Q9HCI7 577 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 CHMP1AQ9HD42 196 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-226ENST00000508740 Q9N2K0 584 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 DECR2Q9NUI1 292 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 NECAP2Q9NVZ3 263 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 DUSP13Q9UII6 198 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 MGAT4AQ9UM21 535 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 ABCA12Q86UK0 2595 aa6.74□□□□□ -1.33
NR1I3-226ENST00000508740 DOPEY1Q5JWR5 2465 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 TRBV6-6A0A0A6YYG2 114 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 TRGV8A0A0C4DH27 118 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 IGHV3-64DA0A0J9YX35 117 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 SLC22A5O76082 557 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 NXPH2O95156 264 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 SIX6O95475 246 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 SFT2D2O95562 160 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 PGAM2P15259 253 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 HLA-GP17693 338 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 VAMP1P23763 118 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 FCGR2CP31995 323 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 CCKARP32238 428 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 CASP6P55212 293 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 H2BFSP57053 126 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 RIPPLY3P57055 190 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 IL13RA1P78552 427 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 RBM39Q14498 530 aaKnown RBP6.73□□□□□ -1.33
NR1I3-226ENST00000508740 ZNF146Q15072 292 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 TMEM128Q5BJH2 165 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 Q5BKY6 102 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 C11orf88Q6PI97 169 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 SLC22A25Q6T423 547 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 TREML4Q6UXN2 200 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 Q6ZPA2 131 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 C9orf62Q8N4C0 152 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 POC1AQ8NBT0 407 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 ST6GALNAC3Q8NDV1 305 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 NEK7Q8TDX7 302 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 TMEM171Q8WVE6 324 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 EDARADDQ8WWZ3 215 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 RDH5Q92781 318 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 TMEM230Q96A57 120 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 PHB2Q99623 299 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 TMEM246Q9BRR3 403 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 WDR13Q9H1Z4 485 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 LIME1Q9H400 295 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 HES4Q9HCC6 221 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 PLSCR3Q9NRY6 295 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 PAIP2BQ9ULR5 123 aaKnown RBP6.73□□□□□ -1.33
NR1I3-226ENST00000508740 MEMO1Q9Y316 297 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 HSPB11Q9Y547 144 aa6.73□□□□□ -1.33
NR1I3-226ENST00000508740 C2CD3Q4AC94 2353 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 IGLV3-9A0A075B6K5 115 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 A0A0B4J2A0 478 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 TRDCB7Z8K6 153 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 ATP6V1G2-DDX39BF2Z307 99 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 SIRPB1O00241 398 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 HSPB6O14558 160 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 SH2D1BO14796 132 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 RGS13O14921 159 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 SNAPC5O75971 98 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 RGS11O94810 467 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 DUS4LO95620 317 aaKnown RBP6.72□□□□□ -1.33
NR1I3-226ENST00000508740 PTBP3O95758 552 aaKnown RBP6.72□□□□□ -1.33
NR1I3-226ENST00000508740 OR2H2O95918 312 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 THBDP07204 575 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 CTSDP07339 412 aaPredicted RBP6.72□□□□□ -1.33
NR1I3-226ENST00000508740 CTXN2P0C2S0 81 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 ZNF44P15621 663 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 RPS2P15880 293 aaKnown RBP6.72□□□□□ -1.33
NR1I3-226ENST00000508740 PPP3CBP16298 524 aa6.72□□□□□ -1.33
NR1I3-226ENST00000508740 PI3P19957 117 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms