RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 TRAPPC2LH3BP13 241 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 H7C1Q1 480 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 DIRAS3O95661 229 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 SCGB1D2O95969 90 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 DUSP1P28562 367 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 FGF12P61328 243 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 BLOC1S1P78537 153 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 HIKESHIQ53FT3 197 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 PHLDA2Q53GA4 152 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 BRICD5Q6PL45 260 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 Q6ZT83 130 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 LINC00596Q86U02 117 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 SVBPQ8N300 66 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 OR5T2Q8NGG2 359 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 TAAR6Q96RI8 345 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 TSNAXQ99598 290 aaKnown RBP9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 NKX6-2Q9C056 277 aaPredicted RBP9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 PLK3Q9H4B4 646 aa9.9□□□□□ -0.82
PRPF40B-203ENST00000508736 ATG12O94817 140 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 BCL3P20749 454 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 HAAOP46952 286 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 GPM6AP51674 278 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 RPL7L1Q6DKI1 246 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 C1orf162Q8NEQ5 155 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 OR5A2Q8NGI9 324 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 OR5L1Q8NGL2 311 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 SLAMF9Q96A28 289 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 SPACA1Q9HBV2 294 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 TMED3Q9Y3Q3 217 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 DSPP15924 2871 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 KIR2DS1A0A191URI9 304 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 PPYP01298 95 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 TK1P04183 234 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 FAM157CP0CG43 387 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 COX5AP20674 150 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 AADACP22760 399 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 IGHV1-2P23083 117 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 KIR2DS4P43632 304 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 NPBWR2P48146 333 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 PJVKQ0ZLH3 352 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 IL13RA2Q14627 380 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 KIR2DS1Q14954 304 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 TBR1Q16650 682 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 ACSF3Q4G176 576 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 MDP1Q86V88 176 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 BOLLQ8N9W6 283 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 SMIM8Q96KF7 97 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 C18orf12Q96KH6 178 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 RCC2Q9P258 522 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 ZNF629Q9UEG4 869 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 FBXL17Q9UF56 701 aa9.89□□□□□ -0.83
PRPF40B-203ENST00000508736 BORCS7-ASMTA0A0B4J1R7 106 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 OR5B21A6NL26 309 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 ANKRD30BLA7E2S9 258 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 ZNF732B4DXR9 585 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 PHF1O43189 567 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 MED6O75586 246 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 CTXN2P0C2S0 81 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 CCL2P13500 99 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 ZNF14P17017 642 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 KIR2DL2P43627 348 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 SULT1A2P50226 295 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 TBC1D28Q2M2D7 210 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 SP6Q3SY56 376 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 GPR157Q5UAW9 335 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 TMEM268Q5VZI3 342 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 FBXW12Q6X9E4 464 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 ZNF565Q8N9K5 539 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 NEK7Q8TDX7 302 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 HPSE2Q8WWQ2 592 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 SPIN2AQ99865 258 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 SPIN2BQ9BPZ2 258 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 RIMS4Q9H426 269 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 TREM1Q9NP99 234 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 PLSCR4Q9NRQ2 329 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 MPC1Q9Y5U8 109 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 ACACBO00763 2458 aa9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 TPRP12270 2363 aaKnown RBP9.88□□□□□ -0.83
PRPF40B-203ENST00000508736 PTPRQQ9UMZ3 2332 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 CD300LBA8K4G0 201 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 ST8SIA3O43173 380 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 GPR137BO60478 399 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 NGFP01138 241 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 MBPP02686 304 aaPredicted RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 WNT5AP41221 380 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 TMEM33P57088 247 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 UBE2NP61088 152 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 MRPL49Q13405 166 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 PDCD1Q15116 288 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 GABRA6Q16445 453 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 SWI5Q1ZZU3 235 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 ATRAIDQ6UW56 229 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 LYZL2Q7Z4W2 148 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 ZNF573Q86YE8 665 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 FAM219AQ8IW50 185 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 GCNT2Q8N0V5 402 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 SPAG16Q8N0X2 631 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 C9orf106Q8NAJ2 232 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 UBAC2Q8NBM4 344 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 MSI2Q96DH6 328 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms