RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PTBP2Q9UKA9 531 aaKnown RBP2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 HYOU1Q9Y4L1 999 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 IGHV3-15A0A0B4J1V0 119 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 IGHV3-74A0A0B4J1X5 117 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 A0A0G2JMP0 313 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 A0A0X1KG70 313 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 GOLGA8KD6RF30 607 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 TRAPPC2LH3BP13 241 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 GOLGA8TH3BQL2 631 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 GMFGO60234 142 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 PROSCO94903 275 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 IGHV2-5P01817 119 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 CATP04040 527 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 SERPINA6P08185 405 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 RPL22P35268 128 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 CHI3L1P36222 383 aaPredicted RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 CDKN2BP42772 138 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 MARCKSL1P49006 195 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 SNRPD2P62316 118 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 CRADDP78560 199 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 LCN2P80188 198 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 HTD2P86397 168 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 SLAMF1Q13291 335 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 DEFB112Q30KQ8 113 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 C18orf21Q32NC0 220 aaPredicted RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 TIMM23BQ5SRD1 257 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 SAXO2Q658L1 398 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 PTRHD1Q6GMV3 140 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 SCIMPQ6UWF3 145 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 ZNF493Q6ZR52 646 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 Q6ZT83 130 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 WDFY1Q8IWB7 410 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 RIBC1Q8N443 379 aaPredicted RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 OR4M2Q8NGB6 313 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 TRMT10AQ8TBZ6 339 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 ZNF75CPQ92670 426 aaPredicted RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 L3HYPDHQ96EM0 354 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 DOK1Q99704 481 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 CCT7Q99832 543 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 RNF5Q99942 180 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 DSN1Q9H410 356 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 HAUS4Q9H6D7 363 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 ANKRA2Q9H9E1 313 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 CA10Q9NS85 328 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 FARSBQ9NSD9 589 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 LYARQ9NX58 379 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 MED11Q9P086 117 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 RNF14Q9UBS8 474 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 NUP50Q9UKX7 468 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 CFAP45Q9UL16 551 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 PSG8Q9UQ74 426 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 SIGLEC9Q9Y336 463 aa2.29□□□□□ -2.04
TOPBP1-206ENST00000508524 IGHV1-18A0A0C4DH31 117 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 J3QLI3 93 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 hCG_2039718K7EN88 272 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 CST8O60676 142 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 CDRT1O95170 752 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 FGFR1OPO95684 399 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 HSMCR30P0CW71 290 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 GZMAP12544 262 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 GGT1P19440 569 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 RPS3P23396 243 aaKnown RBP eCLIP2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 DEKP35659 375 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 HSD17B2P37059 387 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 PPP1R2P41236 205 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 DSCR4P56555 118 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 SCRN3Q0VDG4 424 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 STX5Q13190 355 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 POU2AF1Q16633 256 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 SLC36A3Q495N2 470 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 C9orf135Q5VTT2 229 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 NPSR1Q6W5P4 371 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 CPNE9Q8IYJ1 553 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 GATSQ8NAP1 163 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 NECAP1Q8NC96 275 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 OR2V1Q8NHB1 315 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 FAM110BQ8TC76 370 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 TMBIM1Q969X1 311 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 MUCL1Q96DR8 90 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 DTNBP1Q96EV8 351 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 SNF8Q96H20 258 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 FAIM2Q9BWQ8 316 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 OSBPL10Q9BXB5 764 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 GOLPH3Q9H4A6 298 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 CXorf21Q9HAI6 301 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 POLE3Q9NRF9 147 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 MYEF2Q9P2K5 600 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 AURKCQ9UQB9 309 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 LRP1BQ9NZR2 4599 aa2.28□□□□□ -2.04
TOPBP1-206ENST00000508524 DOCK11Q5JSL3 2073 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 hCG_1818297A0A087WSY0 165 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 A0A087X0T9 212 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 UQCRHLA0A096LP55 91 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 A0A1B0GWJ7 208 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF850A8MQ14 1090 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 MGRN1O60291 552 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 SCELO95171 688 aa2.27□□□□□ -2.05
TOPBP1-206ENST00000508524 FAM228BP0C875 321 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms