RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PXT1Q8NFP0 134 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 OR5AU1Q8NGC0 362 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 OR51A2Q8NGJ7 313 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 Q96MT0 163 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 RBM14Q96PK6 669 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 MRPS18AQ9NVS2 196 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 KBTBD11-OT1A0A1B0GTJ5 212 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 LOC100130705A0A1B0GUX0 176 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 H3BUI4 141 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 LPLP06858 475 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 CEACAM3P40198 252 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 ARHGDIBP52566 201 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 GTF2A1P52655 376 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 PAX5Q02548 391 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 RBM39Q14498 530 aaKnown RBP10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 ABCA11PQ4W5N1 156 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 PAN3Q58A45 887 aaKnown RBP10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 XAF1Q6GPH4 301 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 REC114Q7Z4M0 266 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 OR13A1Q8NGR1 328 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 CNIH3Q8TBE1 160 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 CREB3L1Q96BA8 519 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 PHF21AQ96BD5 680 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 JAM3Q9BX67 310 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 LINC00574Q9H8X3 128 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM118AQ9NWS6 357 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 TAS2R4Q9NYW5 299 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 CALYQ9NYX4 217 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 OR6C3Q9NZP0 311 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 KIF25Q9UIL4 384 aa10.37□□□□□ -0.75
HMGCS1-205ENST00000508319 A0A1W2PRX2 142 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 SH2D7A6NKC9 451 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 OOSP1A8MZH6 123 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 TOR1AO14656 332 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 WBP4O75554 376 aaKnown RBP10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 RAB3AP20336 220 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 NFYBP25208 207 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 OR3A4PP47883 348 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 SOX2P48431 317 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 GBX2P52951 348 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 IL13RA2Q14627 380 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 SMN1Q16637 294 aaKnown RBP10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 PIGYQ3MUY2 71 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 RSBN1Q5VWQ0 802 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 CCDC144NLQ6NUI1 221 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 CCDC121Q6ZUS5 278 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 PQLC1Q8N2U9 271 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 Q8NFD4 153 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 OR10K1Q8NGX5 313 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 OR9G1Q8NH87 305 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 PLPPR1Q8TBJ4 325 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 HAVCR2Q8TDQ0 301 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 TNFAIP8L1Q8WVP5 186 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 CAPSLQ8WWF8 208 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 STMN2Q93045 179 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 CPNE2Q96FN4 548 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 NR1H4Q96RI1 486 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM192AQ9GZU8 254 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 NCOR1P1Q9H4R4 102 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 S100A14Q9HCY8 104 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 ZNF581Q9P0T4 197 aa10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 RPL36Q9Y3U8 105 aaKnown RBP10.36□□□□□ -0.75
HMGCS1-205ENST00000508319 MEIKINA0A087WXM9 373 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 IL1AP01583 271 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 MNDAP41218 407 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 PRRX1P54821 245 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 KLHL22Q53GT1 634 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 C10orf99Q6UWK7 81 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 ASCL4Q6XD76 172 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 WFDC9Q8NEX5 89 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 GPR148Q8TDV2 347 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 LEAP2Q969E1 77 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 TOMM40LQ969M1 308 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 GPER1Q99527 375 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 FGF20Q9NP95 211 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 NECAP2Q9NVZ3 263 aa10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 AURKAIP1Q9NWT8 199 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-205ENST00000508319 A0A1W2PPI3 338 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A18PA6NE21 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A16PA6NEW6 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A20PA6NIJ5 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A9PA6NNJ1 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A12PA8MX19 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A5PA8MXJ8 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 NPIPB11E5RHQ5 1161 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 J3QR06 171 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 M0QZK8 103 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 PIN1P1O15428 100 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 MAGEB3O15480 346 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 IGHV3-7P01780 117 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 CD2P06729 351 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A15PP0C7V4 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A13PP0C7W8 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A14PP0C7W9 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 FAM90A24PP0C7X0 464 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 PF4V1P10720 104 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 SSTR5P35346 364 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 KCNJ3P48549 501 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 ETV1P50549 477 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms