RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 MAGEB3O15480 346 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 FBXO24O75426 580 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 CD28P10747 220 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 NFYBP25208 207 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 CD34P28906 385 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 BDH1Q02338 343 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 CCDC58Q4VC31 144 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 TMPRSS11AQ6ZMR5 421 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 RTN4RL2Q86UN3 420 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 ZFP41Q8N8Y5 198 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 OR13A1Q8NGR1 328 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 PLPPR1Q8TBJ4 325 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 ZNF596Q8TC21 504 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 WIPF2Q8TF74 440 aaPredicted RBP11.45□□□□□ -0.58
RAB28-205ENST00000508274 SMIM19Q96E16 107 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 PRSS22Q9GZN4 317 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 DPM3Q9P2X0 92 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 KIF25Q9UIL4 384 aa11.45□□□□□ -0.58
RAB28-205ENST00000508274 MAGEA13PA6NCF6 341 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 ZNF729A6NN14 1252 aaPredicted RBP11.44□□□□□ -0.58
RAB28-205ENST00000508274 OGG1O15527 345 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 HTR3BO95264 441 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 IGHV3-7P01780 117 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 CD2P06729 351 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 MYL12AP19105 171 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 RBM39Q14498 530 aaKnown RBP11.44□□□□□ -0.58
RAB28-205ENST00000508274 RCN1Q15293 331 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 RSU1Q15404 277 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 HLA-DRB5Q30154 266 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 NSUN5P1Q3KNT7 163 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 DDI2Q5TDH0 399 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 OR4D6Q8NGJ1 314 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 LEAP2Q969E1 77 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 CPNE2Q96FN4 548 aaPredicted RBP11.44□□□□□ -0.58
RAB28-205ENST00000508274 KIRREL1Q96J84 757 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 OR6C3Q9NZP0 311 aa11.44□□□□□ -0.58
RAB28-205ENST00000508274 EXOSC1Q9Y3B2 195 aaKnown RBP11.44□□□□□ -0.58
RAB28-205ENST00000508274 MEIKINA0A087WXM9 373 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 A0A087X0M5 115 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 TRAV39A0A0B4J263 110 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 KBTBD11-OT1A0A1B0GTJ5 212 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 A0A1B0GX30 115 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 BUB1B-PAK6H3BSN5 160 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 GNAO1P09471 354 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 CGB3P0DN86 165 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 CGB7P0DN87 165 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 PPP3R1P63098 170 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 ADARB1P78563 741 aaKnown RBP11.43□□□□□ -0.58
RAB28-205ENST00000508274 IL13RA2Q14627 380 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 ARSJQ5FYB0 599 aaPredicted RBP11.43□□□□□ -0.58
RAB28-205ENST00000508274 RSBN1Q5VWQ0 802 aaPredicted RBP11.43□□□□□ -0.58
RAB28-205ENST00000508274 TTC23Q5W5X9 447 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 ASCL4Q6XD76 172 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 DHRSXQ8N5I4 330 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 Q8NFD4 153 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 WNT10AQ9GZT5 417 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 TMEM138Q9NPI0 162 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 BABAM2Q9NXR7 383 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 CALYQ9NYX4 217 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 ING4Q9UNL4 249 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 ZNF281Q9Y2X9 895 aa11.43□□□□□ -0.58
RAB28-205ENST00000508274 PNMA8CA0A1B0GUJ8 204 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 A0A1W2PP11 408 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 IRGMA1A4Y4 181 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 LEUTXA8MZ59 168 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 G3V4G9 280 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 OPN1MWP04001 364 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 ALDOBP05062 364 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 OPN1MW2P0DN77 364 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 OPN1MW3P0DN78 364 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 SERPINA2P20848 420 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 ZNF93P35789 620 aaPredicted RBP11.42□□□□□ -0.58
RAB28-205ENST00000508274 VDAC2P45880 294 aaPredicted RBP11.42□□□□□ -0.58
RAB28-205ENST00000508274 RPS11P62280 158 aaKnown RBP eCLIP11.42□□□□□ -0.58
RAB28-205ENST00000508274 DOC2BQ14184 412 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 LTC4SQ16873 150 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 TPTE2P1Q5T6R2 138 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 DMKNQ6E0U4 476 aaPredicted RBP11.42□□□□□ -0.58
RAB28-205ENST00000508274 LAIR2Q6ISS4 152 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 DTX3Q8N9I9 347 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 ZNF485Q8NCK3 441 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 SETD9Q8NE22 299 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 OR52N1Q8NH53 320 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 MRGPRDQ8TDS7 321 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 GGHQ92820 318 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 GHSRQ92847 366 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 TMEM80Q96HE8 168 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 PGLYRP3Q96LB9 341 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 CITED2Q99967 270 aaPredicted RBP11.42□□□□□ -0.58
RAB28-205ENST00000508274 ST3GAL6Q9Y274 331 aa11.42□□□□□ -0.58
RAB28-205ENST00000508274 TRAV8-7A0A075B6U6 113 aa11.41□□□□□ -0.58
RAB28-205ENST00000508274 TRBV5-5A0A0J9YX44 114 aa11.41□□□□□ -0.58
RAB28-205ENST00000508274 SH2D7A6NKC9 451 aaPredicted RBP11.41□□□□□ -0.58
RAB28-205ENST00000508274 ADARB2-AS1A8MUL3 147 aa11.41□□□□□ -0.58
RAB28-205ENST00000508274 LY6LH3BQJ8 138 aa11.41□□□□□ -0.58
RAB28-205ENST00000508274 TOR1AO14656 332 aa11.41□□□□□ -0.58
RAB28-205ENST00000508274 XPNPEP2O43895 674 aa11.41□□□□□ -0.58
RAB28-205ENST00000508274 IGFBP3P17936 291 aaPredicted RBP11.41□□□□□ -0.58
RAB28-205ENST00000508274 BDKRB2P30411 391 aa11.41□□□□□ -0.58
RAB28-205ENST00000508274 SSTR5P35346 364 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms