RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 GMPPAQ96IJ6 420 aaPredicted RBP6.21□□□□□ -1.42
PDGFRA-206ENST00000508170 ZNF649Q9BS31 505 aa6.21□□□□□ -1.42
PDGFRA-206ENST00000508170 HDGFL3Q9Y3E1 203 aa6.21□□□□□ -1.42
PDGFRA-206ENST00000508170 DDX60LQ5H9U9 1706 aaKnown RBP6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 CORTO00230 105 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 CRLF1O75462 422 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 TTRP02766 147 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 TFAP2AP05549 437 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 PGA5P0DJD9 388 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 PLP2Q04941 152 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 TMEM187Q14656 261 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 ZNF239Q16600 458 aaKnown RBP6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 SPATA31B1PQ5VZV4 182 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 AWAT2Q6E213 333 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 NEGR1Q7Z3B1 354 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 CROCCP2Q86T23 111 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 TMEM150AQ86TG1 271 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 PDZD9Q8IXQ8 264 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 KLHDC8BQ8IXV7 354 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 MFSD8Q8NHS3 518 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 OR51E1Q8TCB6 317 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 RNF157Q96PX1 679 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 SSR3Q9UNL2 185 aa6.2□□□□□ -1.42
PDGFRA-206ENST00000508170 A0A087X0T9 212 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 EDIL3O43854 480 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 GADD45GO95257 159 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 PGA4P0DJD7 388 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 PGA3P0DJD8 388 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 OR5H8P0DN80 308 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 PSG1P11464 419 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 CXCL3P19876 107 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 BTN1A1Q13410 526 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 HSD17B12Q53GQ0 312 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 ZNF684Q5T5D7 378 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 ZNF626Q68DY1 528 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 ZNF620Q6ZNG0 422 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 Q6ZTK2 550 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 NAA40Q86UY6 237 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 PNKDQ8N490 385 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 C9orf62Q8N4C0 152 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 OR1S1Q8NH92 325 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 RBM22Q9NW64 420 aaKnown RBP eCLIP6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 MYH4Q9Y623 1939 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 PLIN4Q96Q06 1357 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 FAM236DA0A1B0GTK5 79 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 SMIM31A0A1B0GVY4 71 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 F6UB75 175 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 WDR1O75083 606 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 FAM236CP0DP71 79 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 WT1P19544 449 aaPredicted RBP6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 SLC35A1P78382 337 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 EFEMP1Q12805 493 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 SHHQ15465 462 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 FBXL22Q6P050 247 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 MRPL55Q7Z7F7 128 aaKnown RBP6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 COX18Q8N8Q8 333 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 ZFP41Q8N8Y5 198 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 OR4M1Q8NGD0 313 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 TMEM255BQ8WV15 326 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 GPR82Q96P67 336 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 FAAP24Q9BTP7 215 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 DOHHQ9BU89 302 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 SUCNR1Q9BXA5 334 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 PLSCR3Q9NRY6 295 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 MRPL27Q9P0M9 148 aaKnown RBP6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 ERG28Q9UKR5 140 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 RAB22AQ9UL26 194 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 FOCADQ5VW36 1801 aa6.19□□□□□ -1.42
PDGFRA-206ENST00000508170 LY75O60449 1722 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 EEF1E1-BLOC1S5C9J1V9 151 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 EEF1E1O43324 174 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 SLC37A4O43826 429 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 FGF17O60258 216 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 HIST1H1BP16401 226 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 TECRLQ5HYJ1 363 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 STEAP4Q687X5 459 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 SLC18B1Q6NT16 456 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 IGFL2Q6UWQ7 119 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 C1orf158Q8N1D5 194 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 C12orf45Q8N5I9 185 aaPredicted RBP6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 OR4E2Q8NGC2 313 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 NAT14Q8WUY8 206 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 CYGBQ8WWM9 190 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 SRSF12Q8WXF0 261 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 BORCS7Q96B45 105 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 TP53RKQ96S44 253 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 LINC00470Q9BZP3 86 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 LPAR5Q9H1C0 372 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 CST9LQ9H4G1 147 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 ISG20L2Q9H9L3 353 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 LHX9Q9NQ69 397 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 TAS2R16Q9NYV7 291 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 ANXA10Q9UJ72 324 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 TNFSF18Q9UNG2 199 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 FZD1Q9UP38 647 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 IGKV6D-41A0A0C4DH26 115 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 K7EQS6 105 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 NCR1O76036 304 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 CLDN14O95500 239 aa6.18□□□□□ -1.42
PDGFRA-206ENST00000508170 CHRNB2P17787 502 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms