RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 H3BNH8 94 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 ZNF701M0R085 212 aaPredicted RBP4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 GNGT2O14610 69 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 CHST10O43529 356 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 UGT2B11O75310 529 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 HMGN2P05204 90 aaKnown RBP4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 DCNP07585 359 aaKnown RBP4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 NR2C1P13056 603 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 NELFEP18615 380 aaKnown RBP4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 M6PRP20645 277 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 LCN1P31025 176 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 NUP62P37198 522 aaPredicted RBP4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 RPL5P46777 297 aaKnown RBP4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 ERFP50548 548 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 CDK9P50750 372 aaKnown RBP4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 REG3AQ06141 175 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 APOFQ13790 326 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 DGCR6Q14129 220 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 C1orf185Q5T7R7 199 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 DHRS4L2Q6PKH6 230 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 TBPL2Q6SJ96 375 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 ZNF836Q6ZNA1 936 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 CLVS1Q8IUQ0 354 aaPredicted RBP4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 CA13Q8N1Q1 262 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 CDRT4Q8N9R6 151 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 OR4C6Q8NH72 309 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 MAL2Q969L2 176 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 REEP1Q9H902 201 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 SPACA1Q9HBV2 294 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 INIPQ9NRY2 104 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 TRAPPC4Q9Y296 219 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 TP53TG5Q9Y2B4 290 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 MMACHCQ9Y4U1 282 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 CACNG2Q9Y698 323 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 TNRC6BQ9UPQ9 1833 aaKnown RBP4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 TTC28Q96AY4 2481 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 SDK1Q7Z5N4 2213 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 PCDH15Q96QU1 1955 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 SCN2AQ99250 2005 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 NINQ8N4C6 2090 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 IGKV3D-11A0A0A0MRZ8 115 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 IGKV1D-13A0A0B4J2D9 117 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 IGHV5-51A0A0C4DH38 117 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 LOC100130705A0A1B0GUX0 176 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 A0A1B0GVG6 124 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 ZNF879B4DU55 563 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 C5orf58C9J3I9 102 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 EIF3GO75821 320 aaKnown RBP eCLIP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 ZNF682O95780 498 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 CRYZL1O95825 349 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 C1QCP02747 245 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 IFNW1P05000 195 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 GP1BAP07359 652 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 OR12D1P0DN82 309 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 IGKV1-13P0DP09 117 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 RPS4Y1P22090 263 aaKnown RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 FGF8P55075 233 aaPredicted RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 VSX2P58304 361 aaPredicted RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 ZNF92Q03936 586 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 ILKQ13418 452 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 MPPED2Q15777 294 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 SGCAQ16586 387 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 DEFB133Q30KQ1 61 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 RBM48Q5RL73 367 aaKnown RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 C6orf52Q5T4I8 152 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 VTCN1Q7Z7D3 282 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 CYP4Z1Q86W10 505 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 TTC29Q8NA56 475 aaPredicted RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 PLPP5Q8NEB5 264 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 OR7G2Q8NG99 324 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 GPR32P1Q8NGA4 272 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 PHF10Q8WUB8 498 aaKnown RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 NAT6Q93015 286 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 SLC35G5Q96KT7 338 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 OR7D2Q96RA2 312 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 PITX2Q99697 317 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 RSPO3Q9BXY4 272 aaPredicted RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 GABARAPL3Q9BY60 117 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 MRPS26Q9BYN8 205 aaKnown RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 SLC38A1Q9H2H9 487 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 OR51I1Q9H343 314 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 ARMC7Q9H6L4 198 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 TRIM45Q9H8W5 580 aaPredicted RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 CXorf21Q9HAI6 301 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 NMNAT1Q9HAN9 279 aaPredicted RBP4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 MAT2BQ9NZL9 334 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 SPTBP11277 2137 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 SCN3AQ9NY46 2000 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 RP1P56715 2156 aa4.43□□□□□ -1.7
COL6A4P1-204ENST00000508169 ASCC3Q8N3C0 2202 aaKnown RBP4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 A0A087WXM4 84 aa4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 A6NDX4 124 aa4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 ZNF726A6NNF4 738 aa4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 TNFRSF11BO00300 401 aa4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 PEX7O00628 323 aa4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 FFAR1O14842 300 aa4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 GATCO43716 136 aaKnown RBP4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 MPZL2O60487 215 aa4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 TPST1O60507 370 aa4.42□□□□□ -1.7
COL6A4P1-204ENST00000508169 DNAJB6O75190 326 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms