RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ZNF691Q5VV52 312 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 CCDC144NLQ6NUI1 221 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 SERPINA12Q8IW75 414 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 SYS1Q8N2H4 156 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 PARP16Q8N5Y8 322 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 OR13A1Q8NGR1 328 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 OR9G1Q8NH87 305 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 TSEN15Q8WW01 171 aaKnown RBP9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 LEAP2Q969E1 77 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 TOMM40LQ969M1 308 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 RPEQ96AT9 228 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 NR1H4Q96RI1 486 aaPredicted RBP9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 CALYQ9NYX4 217 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 KIF25Q9UIL4 384 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 MOB4Q9Y3A3 225 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 HSPE1-MOB4S4R3N1 261 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 MEIKINA0A087WXM9 373 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 TRAV24A0A0B4J272 114 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 TMEM212A6NML5 194 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 E9PI62 339 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 H3BNX3 289 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 M0QZK8 103 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 GABRPO00591 440 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 ZFPL1O95159 310 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 IGHV3-7P01780 117 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 SNRNP70P08621 437 aaKnown RBP9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM106CPP0CH98 169 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 CGB3P0DN86 165 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 CGB7P0DN87 165 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 GABRB1P18505 474 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 ALDH3A2P51648 485 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 LTC4SQ16873 150 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 OSR2Q8N2R0 312 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 CBR4Q8N4T8 237 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 OR51T1Q8NGJ9 327 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 OR5D14Q8NGL3 314 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 OR56B4Q8NH76 319 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 OR5AK2Q8NH90 309 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 RCC1LQ96I51 464 aaKnown RBP9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 MYCBPQ99417 103 aaPredicted RBP9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 PDCD1LG2Q9BQ51 273 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 PCDHB16Q9NRJ7 776 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 INPP5EQ9NRR6 644 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 ERVK13-1Q9NX77 482 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 IDI2-AS1Q9NZ38 188 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 DHDHQ9UQ10 334 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 AMMECR1Q9Y4X0 333 aaPredicted RBP9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 GMPPBQ9Y5P6 360 aa9.17□□□□□ -0.94
HMGCS1-204ENST00000507293 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 PSMB11A5LHX3 300 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A18PA6NE21 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A16PA6NEW6 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A20PA6NIJ5 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A9PA6NNJ1 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A12PA8MX19 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A5PA8MXJ8 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 J3QR06 171 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 K7EIL1 84 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 CLIC3O95833 236 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 IL1AP01583 271 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 CCDC159P0C7I6 412 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A15PP0C7V4 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A13PP0C7W8 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A14PP0C7W9 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM90A24PP0C7X0 464 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 GNG10P50151 68 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 DIAPH2-AS1Q14236 149 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 IL13RA2Q14627 380 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 PIGYQ3MUY2 71 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 RSBN1Q5VWQ0 802 aaPredicted RBP9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 ELP2Q6IA86 826 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 SATL1Q86VE3 508 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 ZNF565Q8N9K5 539 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 PXT1Q8NFP0 134 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 OR51A2Q8NGJ7 313 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 OR10K1Q8NGX5 313 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 CNIH3Q8TBE1 160 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 PLPPR1Q8TBJ4 325 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 MRGPRDQ8TDS7 321 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 TNFAIP8L1Q8WVP5 186 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 GPER1Q99527 375 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 ZNF649Q9BS31 505 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 FAM192AQ9GZU8 254 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 AMBNQ9NP70 447 aa9.16□□□□□ -0.94
HMGCS1-204ENST00000507293 TRAV39A0A0B4J263 110 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 MAGEB3O15480 346 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 DUS4LO95620 317 aaKnown RBP9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 FADS2O95864 444 aaKnown RBP9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 RPSAP08865 295 aaKnown RBP9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 TMEM11P17152 192 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 RAB3AP20336 220 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 C21orf33P30042 268 aaPredicted RBP9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 SSTR5P35346 364 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 SOX2P48431 317 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 GBX2P52951 348 aaPredicted RBP9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 KRTAP10-11P60412 298 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 MRPL28Q13084 256 aaKnown RBP9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 MADCAM1Q13477 382 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 HES1Q14469 280 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 ZNF529Q6P280 563 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms