RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 SMIM18P0DKX4 95 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 CD36P16671 472 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 MYL9P24844 172 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 CLDN12P56749 244 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 SIGIRRQ6IA17 410 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 BRICD5Q6PL45 260 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 ZNF782Q6ZMW2 699 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-210ENST00000506941 PNKDQ8N490 385 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 PIP4P2Q8N4L2 257 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 SIGLECL1Q8N7X8 197 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 ZNF714Q96N38 554 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 SUCNR1Q9BXA5 334 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 CST11Q9H112 138 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 RCC2Q9P258 522 aaKnown RBP14.86□□□□□ -0.03
NPHP4-210ENST00000506941 V9GY05 133 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 COL6A5A8TX70 2615 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 A0A1W2PRD5 423 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 A0A1W2PRF3 423 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 A0A1W2PRM7 423 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 TMEM14DPA8MWL7 114 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 TCF21O43680 179 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 VENTXO95231 258 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 MPIG6BO95866 241 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 JUNBP17275 347 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-210ENST00000506941 BPIFB3P59826 476 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 PAX5Q02548 391 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 RAB11BQ15907 218 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 ATAD3CQ5T2N8 411 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 HES5Q5TA89 166 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 RSBN1Q5VWQ0 802 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-210ENST00000506941 NCR3LG1Q68D85 454 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 USP43Q70EL4 1123 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 ZNF418Q8TF45 676 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-210ENST00000506941 CORO2AQ92828 525 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 CHCHD6Q9BRQ6 235 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 RNF167Q9H6Y7 350 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 ESM1Q9NQ30 184 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 KIF25Q9UIL4 384 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 SSR3Q9UNL2 185 aa14.85□□□□□ -0.03
NPHP4-210ENST00000506941 UBE2J1Q9Y385 318 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-210ENST00000506941 FUOMA2VDF0 154 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 SMIM30A4D0T7 59 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A10PA6NDY2 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A18PA6NE21 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A16PA6NEW6 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A20PA6NIJ5 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A8PA6NJQ4 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A7PA6NKC0 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A22PA8MWA6 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A12PA8MX19 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A5PA8MXJ8 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A23PA8MXZ1 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 PDCD5O14737 125 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 MMP23AO75900 390 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 RBP4P02753 201 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A15PP0C7V4 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A13PP0C7W8 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A14PP0C7W9 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 FAM90A24PP0C7X0 464 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 KCNJ3P48549 501 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 UBE2E1P51965 193 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 HILS1P60008 231 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 RPS27AP62979 156 aaKnown RBP14.84□□□□□ -0.03
NPHP4-210ENST00000506941 DEFB112Q30KQ8 113 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 TRAPPC6BQ86SZ2 158 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 KCNG3Q8TAE7 436 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 TMEM59Q9BXS4 323 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 VCX3AQ9NNX9 186 aa14.84□□□□□ -0.03
NPHP4-210ENST00000506941 TRGV10A0A0A0MS01 117 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 A0A0A6YYD4 124 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 A0A0U1RQK1 487 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 LOC100506127A0A0U1RQW1 187 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 NPFFO15130 113 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 IGHV1-8P0DP01 117 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 ARSBP15848 533 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 RAB3BP20337 219 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 CFPP27918 469 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 GUCA2AQ02747 115 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 RAB12Q6IQ22 244 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 OR51D1Q8NGF3 324 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 OR13A1Q8NGR1 328 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 FAM3DQ96BQ1 224 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 YIPF6Q96EC8 236 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 NICN1Q9BSH3 213 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 CENPOQ9BU64 300 aa14.83□□□□□ -0.04
NPHP4-210ENST00000506941 MEIKINA0A087WXM9 373 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 A0A0A6YYJ9 748 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 TRAV39A0A0B4J263 110 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 hCG_1809904A0A1W2PP81 198 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 A0A1W2PPE2 198 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 A0A1W2PR64 198 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 A0A1W2PRV1 198 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 IFITM5A6NNB3 132 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 CLPXO76031 633 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 CGB3P0DN86 165 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 CGB7P0DN87 165 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 COX7A1P24310 79 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 GDNFP39905 211 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 PSMD7P51665 324 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 PLA2G7Q13093 441 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms