RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 G3V3Q6 166 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 hCG_2039718K7EN88 272 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 POP7O75817 140 aaKnown RBP1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 GPR75O95800 540 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 CSRP1P21291 193 aaKnown RBP1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 COILP38432 576 aaPredicted RBP1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 PLTPP55058 493 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 CARD18P57730 90 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 CST6Q15828 149 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 TNXAQ16473 311 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 C10orf107Q8IVU9 208 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 PDCL2Q8N4E4 241 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 CIDECQ96AQ7 238 aaPredicted RBP1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 BIRC8Q96P09 236 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 APOL4Q9BPW4 351 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 BTRCQ9Y297 605 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 ZNF337Q9Y3M9 751 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 CEP170Q5SW79 1584 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 POLR3AO14802 1390 aaPredicted RBP1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 COL5A3P25940 1745 aaPredicted RBP1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 ARAP3Q8WWN8 1544 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 MGAT4DA6NG13 374 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 C17orf51A8MQB3 221 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 SLC2A1P11166 492 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 TTPAP49638 278 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 VAMP3Q15836 100 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 CEACAM21Q3KPI0 293 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 PYCR3Q53H96 274 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 HBMQ6B0K9 141 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 NOXRED1Q6NXP6 359 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 SPICQ8N5J4 248 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 OR11G2Q8NGC1 345 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 OR8K1Q8NGG5 319 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 OR2AE1Q8NHA4 323 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 CASTOR1Q8WTX7 329 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 ZMYND19Q96E35 227 aaPredicted RBP1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 PITX2Q99697 317 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 PRRG3Q9BZD7 231 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 TMBIM4Q9HC24 238 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 CLEC2DQ9UHP7 191 aa1.57□□□□□ -2.16
TOPBP1-204ENST00000505804 KMT2EQ8IZD2 1858 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 BAHCC1Q9P281 2608 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 TCF21O43680 179 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 SH2D1AO60880 128 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 PDCD6O75340 191 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 CA2P00918 260 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 GYPCP04921 128 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 ZNF3P17036 446 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 GZMHP20718 246 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 EVI2BP34910 448 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 HBG1P69891 147 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 HBG2P69892 147 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 ZCWPW2Q504Y3 356 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 CAVIN4Q5BKX8 364 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 CLEC20AQ6ZU45 233 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 SCXQ7RTU7 201 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 ZIC4Q8N9L1 334 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 FER1L6-AS1Q8NA97 138 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 GATD1Q8NB37 220 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 Q8NDZ9 215 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 OR4K17Q8NGC6 315 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 OR4A5Q8NH83 315 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 LRRC39Q96DD0 335 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 CMBLQ96DG6 245 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 REEP6Q96HR9 211 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 GLT1D1Q96MS3 346 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 KLF6Q99612 283 aaPredicted RBP1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 B9D2Q9BPU9 175 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 SUCNR1Q9BXA5 334 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 SLC23A2Q9UGH3 650 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 POMPQ9Y244 141 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 URGCP-MRPS24S4R325 110 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 TRIOBPQ9H2D6 2365 aa1.56□□□□□ -2.16
TOPBP1-204ENST00000505804 TRPM3Q9HCF6 1732 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 COL11A1P12107 1806 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 RAB19A4D1S5 217 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 J3QKU1 62 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 LECT2O14960 151 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 EEF1E1O43324 174 aaKnown RBP1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 GUSBP08236 651 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 PSKH1P11801 424 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 CCNOP22674 350 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 RHOAP61586 193 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 PRDX1Q06830 199 aaKnown RBP1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 BAXQ07812 192 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 TRIP13Q15645 432 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 C10orf91Q5T1B1 145 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 NIPAL1Q6NVV3 410 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 ZNF322Q6U7Q0 402 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 ZNF567Q8N184 647 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 OR2V1Q8NHB1 315 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 ARL6Q9H0F7 186 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 MFSD1Q9H3U5 465 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 KCNIP2Q9NS61 270 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 RBMX2Q9Y388 322 aaKnown RBP1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 LINC00588Q9Y4M8 146 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 PHLDA3Q9Y5J5 127 aa1.55□□□□□ -2.16
TOPBP1-204ENST00000505804 A0A1B0GW15 77 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 SHOX2O60902 331 aaPredicted RBP1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 OR12D1P0DN82 309 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms