RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 OR52N4Q8NGI2 321 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 TOMM40LQ969M1 308 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 PRRG3Q9BZD7 231 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 EXOSC4Q9NPD3 245 aaKnown RBP7.82□□□□□ -1.16
NEDD9-210ENST00000505589 MYRFQ9Y2G1 1151 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 R4GMQ9 66 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 TRBV2A0A0J9YWF9 115 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 ZNF670-ZNF695F2Z2N8 137 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 LY6LH3BQJ8 138 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 SYT7O43581 403 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 LY86O95711 162 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 CSN2P05814 226 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 OCM2P0CE71 109 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 OCMP0CE72 109 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-210ENST00000505589 OR5H8P0DN80 308 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 CDK5Q00535 292 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 FOXE3Q13461 319 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 MADCAM1Q13477 382 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 GPR50Q13585 617 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 APOFQ13790 326 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 RBM39Q14498 530 aaKnown RBP7.81□□□□□ -1.16
NEDD9-210ENST00000505589 ZNF260Q3ZCT1 412 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 RBM48Q5RL73 367 aaKnown RBP7.81□□□□□ -1.16
NEDD9-210ENST00000505589 TMEM236Q5W0B7 351 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 ZNF322Q6U7Q0 402 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-210ENST00000505589 SLC25A26Q70HW3 274 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 TPRX1Q8N7U7 411 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 C5orf56Q8N8D9 126 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 CHST4Q8NCG5 386 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 APH1BQ8WW43 257 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 PP6455Q8WZ26 134 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 SLAMF9Q96A28 289 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 RAX2Q96IS3 184 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 CITED4Q96RK1 184 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 PRR25Q96S07 402 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 YTHDF1Q9BYJ9 559 aaKnown RBP7.81□□□□□ -1.16
NEDD9-210ENST00000505589 BARHL1Q9BZE3 327 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 CHST6Q9GZX3 395 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 GHITMQ9H3K2 345 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 SACSQ9NZJ4 4579 aa7.81□□□□□ -1.16
NEDD9-210ENST00000505589 DYNC2H1Q8NCM8 4307 aaKnown RBP7.8□□□□□ -1.16
NEDD9-210ENST00000505589 MEX3AA1L020 520 aaKnown RBP7.8□□□□□ -1.16
NEDD9-210ENST00000505589 M0R129 80 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 PSPNO60542 156 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 WBP4O75554 376 aaKnown RBP7.8□□□□□ -1.16
NEDD9-210ENST00000505589 MMP23AO75900 390 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 PRKACAP17612 351 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 GABRB1P18505 474 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 PRKACBP22694 351 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 GPR12P47775 334 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 HCCSP53701 268 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 MTCP1P56278 107 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 GABARAPL2P60520 117 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 CXCR4P61073 352 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 SNRPGP62308 76 aaKnown RBP7.8□□□□□ -1.16
NEDD9-210ENST00000505589 C6orf141Q5SZD1 244 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 LAIR2Q6ISS4 152 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 TCF23Q7RTU1 214 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 TGIF2LXQ8IUE1 241 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 BATF2Q8N1L9 274 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 OR10A7Q8NGE5 316 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 OR8H1Q8NGG4 311 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 RHOXF1Q8NHV9 184 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 CNIH3Q8TBE1 160 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 TRUB1Q8WWH5 349 aaKnown RBP7.8□□□□□ -1.16
NEDD9-210ENST00000505589 NOL4LQ96MY1 436 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-210ENST00000505589 CNN2Q99439 309 aaKnown RBP7.8□□□□□ -1.16
NEDD9-210ENST00000505589 NCOR1P1Q9H4R4 102 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 LIN7CQ9NUP9 197 aaKnown RBP7.8□□□□□ -1.16
NEDD9-210ENST00000505589 SCOCQ9UIL1 159 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 BLOC1S6Q9UL45 172 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 KLHDC2Q9Y2U9 406 aa7.8□□□□□ -1.16
NEDD9-210ENST00000505589 HUWE1Q7Z6Z7 4374 aaKnown RBP7.8□□□□□ -1.16
NEDD9-210ENST00000505589 A0A1B0GTI1 187 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 KBTBD11-OT1A0A1B0GTJ5 212 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 ODAMA1E959 279 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 A6NIN4 97 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 SH2D7A6NKC9 451 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-210ENST00000505589 NCBP2LA6PVI3 153 aaKnown RBP7.79□□□□□ -1.16
NEDD9-210ENST00000505589 J3QR06 171 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 PRKYO43930 277 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 INMTO95050 263 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 IGHA1P01876 353 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 GAPDHP04406 335 aaKnown RBP7.79□□□□□ -1.16
NEDD9-210ENST00000505589 KRT8P05787 483 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 OR8U8P0C7N1 319 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 SMIM18P0DKX4 95 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 VDAC1P21796 283 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 CCL1P22362 96 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 SLC2A5P22732 501 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 CRHBPP24387 322 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 LUMP51884 338 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-210ENST00000505589 AESQ08117 197 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 UBE2V2Q15819 145 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 KRBOX4Q5JUW0 171 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 PRAMEF5Q5TYX0 476 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 TMEM65Q6PI78 240 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 LHFPL2Q6ZUX7 228 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 SBSPONQ8IVN8 264 aa7.79□□□□□ -1.16
NEDD9-210ENST00000505589 RNF152Q8N8N0 203 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms