RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ZNF407Q9C0G0 2248 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 PHF1O43189 567 aaPredicted RBP14.55□□□□□ -0.08
LIN54-204ENST00000505397 SYNGR4O95473 234 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 PPYP01298 95 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 IFNA4P05014 189 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 GLP1RP43220 463 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 PPT1P50897 306 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 NHLH2Q02577 135 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 COLCA1Q6ZS62 124 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 SLC35G3Q8N808 338 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 PIGCQ92535 297 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 CLCC1Q96S66 551 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 PRDM14Q9GZV8 571 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 TUBA4BQ9H853 241 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 C19orf12Q9NSK7 152 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 FBXO9Q9UK97 447 aaPredicted RBP14.55□□□□□ -0.08
LIN54-204ENST00000505397 GLI4P10075 376 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 CLDN18P56856 261 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 CTAG1AP78358 180 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 PDCD1Q15116 288 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 SRSF7Q16629 238 aaKnown RBP eCLIP14.55□□□□□ -0.08
LIN54-204ENST00000505397 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.55□□□□□ -0.08
LIN54-204ENST00000505397 NAXEQ8NCW5 288 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 C2CD4CQ8TF44 421 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 C12orf57Q99622 126 aa14.55□□□□□ -0.08
LIN54-204ENST00000505397 ZNF552Q9H707 407 aaPredicted RBP14.55□□□□□ -0.08
LIN54-204ENST00000505397 PCP4L1A6NKN8 68 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 MPPED1O15442 326 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FHITP49789 147 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 CCL11P51671 97 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 RNF212Q495C1 297 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 NRN1LQ496H8 165 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM185AQ8N0U4 392 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 ZFP62Q8NB50 900 aaPredicted RBP14.54□□□□□ -0.08
LIN54-204ENST00000505397 BOD1Q96IK1 185 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 SH3BGRL3Q9H299 93 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 C3orf85A0A1B0GTC6 90 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A10PA6NDY2 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A18PA6NE21 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A16PA6NEW6 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A20PA6NIJ5 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A8PA6NJQ4 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A7PA6NKC0 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A22PA8MWA6 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A12PA8MX19 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A5PA8MXJ8 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A23PA8MXZ1 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 CDS2O95674 445 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A15PP0C7V4 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A13PP0C7W8 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A14PP0C7W9 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 FAM90A24PP0C7X0 464 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 CAMLGP49069 296 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 HERV-K104P61576 105 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 ZNF611Q8N823 705 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 SFT2D1Q8WV19 159 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 HIST1H2BAQ96A08 127 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 TMEM56Q96MV1 263 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 USB1Q9BQ65 265 aaKnown RBP14.54□□□□□ -0.08
LIN54-204ENST00000505397 PRRG4Q9BZD6 226 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 TMEM222Q9H0R3 208 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 TMEM56-RWDD3S4R434 201 aa14.54□□□□□ -0.08
LIN54-204ENST00000505397 A0A1B0GW64 132 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 RPL36A-HNRNPH2H7BZ11 118 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 GNRHRP30968 328 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 NPBWR2P48146 333 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 ZNF616Q08AN1 781 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 SLC10A1Q14973 349 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 ZFP82Q8N141 532 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 CPEB3Q8NE35 698 aaKnown RBP14.53□□□□□ -0.08
LIN54-204ENST00000505397 TMEM45BQ96B21 275 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 C14orf79Q96F83 325 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 ZNF442Q9H7R0 627 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 NOSIPQ9Y314 301 aaKnown RBP14.53□□□□□ -0.08
LIN54-204ENST00000505397 TRDCB7Z8K6 153 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 SRPXP78539 464 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 EWSR1Q01844 656 aaKnown RBP eCLIP14.53□□□□□ -0.08
LIN54-204ENST00000505397 AWAT1Q58HT5 328 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 IGSF11Q5DX21 431 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 ATPIF1Q9UII2 106 aa14.53□□□□□ -0.08
LIN54-204ENST00000505397 PTAFRP25105 342 aa14.52□□□□□ -0.08
LIN54-204ENST00000505397 RND3P61587 244 aa14.52□□□□□ -0.08
LIN54-204ENST00000505397 RPS10P5Q9NQ39 176 aa14.52□□□□□ -0.08
LIN54-204ENST00000505397 PARPBPQ9NWS1 579 aa14.52□□□□□ -0.08
LIN54-204ENST00000505397 C7orf77A4D0Y5 90 aa14.52□□□□□ -0.09
LIN54-204ENST00000505397 K7N7A8 449 aa14.52□□□□□ -0.09
LIN54-204ENST00000505397 MRPL33O75394 65 aaKnown RBP14.52□□□□□ -0.09
LIN54-204ENST00000505397 C1QL1O75973 258 aa14.52□□□□□ -0.09
LIN54-204ENST00000505397 OR7C1O76099 320 aaPredicted RBP14.52□□□□□ -0.09
LIN54-204ENST00000505397 RAB5BP61020 215 aa14.52□□□□□ -0.09
LIN54-204ENST00000505397 GNMTQ14749 295 aa14.52□□□□□ -0.09
LIN54-204ENST00000505397 SLC25A26Q70HW3 274 aa14.52□□□□□ -0.09
LIN54-204ENST00000505397 ARID1AO14497 2285 aa14.52□□□□□ -0.09
LIN54-204ENST00000505397 SHANK1Q9Y566 2161 aa14.51□□□□□ -0.09
LIN54-204ENST00000505397 NKX2-6A6NCS4 301 aa14.51□□□□□ -0.09
LIN54-204ENST00000505397 TM4SF5O14894 197 aa14.51□□□□□ -0.09
LIN54-204ENST00000505397 MEOX2P50222 304 aa14.51□□□□□ -0.09
LIN54-204ENST00000505397 TNFSF10P50591 281 aa14.51□□□□□ -0.09
LIN54-204ENST00000505397 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.51□□□□□ -0.09
LIN54-204ENST00000505397 OR2C3Q8N628 320 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms