RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ALDOBP05062 364 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 CDK1P06493 297 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 GABRA5P31644 462 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 KRTAP10-3P60369 221 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 C6orf141Q5SZD1 244 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 ATAD3CQ5T2N8 411 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 HIST2H2BDQ6DRA6 164 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 ELP2Q6IA86 826 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 ABHD12Q8N2K0 398 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 OSR2Q8N2R0 312 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 OR11H6Q8NGC7 330 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 OR4D6Q8NGJ1 314 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 PLPPR1Q8TBJ4 325 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 NEK7Q8TDX7 302 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 FOXRED1Q96CU9 486 aaPredicted RBP11.53□□□□□ -0.56
HOXC9-202ENST00000504557 SCN3BQ9NY72 215 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 TBL2Q9Y4P3 447 aaKnown RBP11.53□□□□□ -0.56
HOXC9-202ENST00000504557 F2RL2O00254 374 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 CHST1O43916 411 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 IGFBP3P17936 291 aaPredicted RBP11.52□□□□□ -0.57
HOXC9-202ENST00000504557 RBM11P57052 281 aaKnown RBP11.52□□□□□ -0.57
HOXC9-202ENST00000504557 IL13RA2Q14627 380 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 INSL4Q14641 139 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 MED22Q15528 200 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 OR4C13Q8NGP0 309 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 LEAP2Q969E1 77 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 MYDGFQ969H8 173 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 MALSU1Q96EH3 234 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 DERL3Q96Q80 235 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 OR5M11Q96RB7 305 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 TMED9Q9BVK6 235 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 MND1Q9BWT6 205 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 CCDC90BQ9GZT6 254 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 TCF7L1Q9HCS4 588 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 FKBP14Q9NWM8 211 aa11.52□□□□□ -0.57
HOXC9-202ENST00000504557 PAK1IP1Q9NWT1 392 aaPredicted RBP11.52□□□□□ -0.57
HOXC9-202ENST00000504557 MRPS28Q9Y2Q9 187 aaKnown RBP11.52□□□□□ -0.57
HOXC9-202ENST00000504557 TRBV5-7A0A0A0MS05 114 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 FAM90A8PA6NJQ4 464 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 TOR1AO14656 332 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 GEMIN2O14893 280 aaKnown RBP11.51□□□□□ -0.57
HOXC9-202ENST00000504557 CSN2P05814 226 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 CD24P25063 80 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 HTR1DP28221 377 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
HOXC9-202ENST00000504557 UTF1Q5T230 341 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 AWAT2Q6E213 333 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 OR52W1Q6IF63 320 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 GLIPR1L1Q6UWM5 242 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 IZUMO2Q6UXV1 221 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 HEPN1Q6WQI6 88 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 C11orf44Q8N8P7 122 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 SUMF2Q8NBJ7 301 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 OR51T1Q8NGJ9 327 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 OR13A1Q8NGR1 328 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 RFESDQ8TAC1 157 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 PIFOQ8TCI5 191 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 MRGPRDQ8TDS7 321 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 DPCDQ9BVM2 203 aaPredicted RBP11.51□□□□□ -0.57
HOXC9-202ENST00000504557 CDCA4Q9BXL8 241 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 BARHL1Q9BZE3 327 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 BANF2Q9H503 90 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 ZNF286AQ9HBT8 521 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 TAS2R3Q9NYW6 316 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 OR6C3Q9NZP0 311 aa11.51□□□□□ -0.57
HOXC9-202ENST00000504557 WNK1Q9H4A3 2382 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 ZNF729A6NN14 1252 aaPredicted RBP11.5□□□□□ -0.57
HOXC9-202ENST00000504557 PIN1P1O15428 100 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 HSMCR30P0CW71 290 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 FSTP19883 344 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 GNG10P50151 68 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 PROK1P58294 105 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 HABP2Q14520 560 aaPredicted RBP11.5□□□□□ -0.57
HOXC9-202ENST00000504557 C17orf58Q2M2W7 97 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 FAM27D1Q5T7N8 215 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 CCBE1Q6UXH8 406 aaPredicted RBP11.5□□□□□ -0.57
HOXC9-202ENST00000504557 ASCL4Q6XD76 172 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 OR4P4Q8NGL7 312 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 UBALD1Q8TB05 177 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 CCDC107Q8WV48 283 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 CORO2AQ92828 525 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 CNBD2Q96M20 576 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 NPFFR1Q9GZQ6 430 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 VCX3BQ9H321 246 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 C16orf95Q9H693 158 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 RAB18Q9NP72 206 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 CALYQ9NYX4 217 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 TCF19Q9Y242 345 aa11.5□□□□□ -0.57
HOXC9-202ENST00000504557 TSPAN9O75954 239 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 VSIG10L2P0DP72 767 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 GTF2F2P13984 249 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 SSTR5P35346 364 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 VHLP40337 213 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 SPHARQ15513 63 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 AANATQ16613 207 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 ACSM3Q53FZ2 586 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 RBM48Q5RL73 367 aaKnown RBP11.49□□□□□ -0.57
HOXC9-202ENST00000504557 PRR31Q5SQ13 230 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 MINOS1Q5TGZ0 78 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 RSBN1Q5VWQ0 802 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms