RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SERTAD4Q9NUC0 356 aa11.27□□□□□ -0.61
PDLIM7-211ENST00000504318 CHCHD3Q9NX63 227 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-211ENST00000504318 PTTG2Q9NZH5 202 aa11.27□□□□□ -0.61
PDLIM7-211ENST00000504318 DIMT1Q9UNQ2 313 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-211ENST00000504318 ERGIC3Q9Y282 383 aa11.27□□□□□ -0.61
PDLIM7-211ENST00000504318 GSTK1Q9Y2Q3 226 aa11.27□□□□□ -0.61
PDLIM7-211ENST00000504318 UBE2J1Q9Y385 318 aaPredicted RBP11.27□□□□□ -0.61
PDLIM7-211ENST00000504318 FAM90A22PA8MWA6 464 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 IGLV1-47P01700 117 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 GABRR1P24046 479 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 PSMB9P28065 219 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 CD34P28906 385 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 C21orf33P30042 268 aaPredicted RBP11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 MAP2K4P45985 399 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 GLIPR1P48060 266 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 OR2G6Q5TZ20 316 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 SERPINA12Q8IW75 414 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 PXT1Q8NFP0 134 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 OR51T1Q8NGJ9 327 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 ISOC1Q96CN7 298 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 MND1Q9BWT6 205 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 TMEM133Q9H2Q1 129 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 TCF7L1Q9HCS4 588 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 EXOSC4Q9NPD3 245 aaKnown RBP11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 ZNF581Q9P0T4 197 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 FOXJ3Q9UPW0 622 aa11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 EXOSC1Q9Y3B2 195 aaKnown RBP11.26□□□□□ -0.61
PDLIM7-211ENST00000504318 A0A087X0M5 115 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 A0A1B0GX30 115 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 GABRPO00591 440 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 SH2D1BO14796 132 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 TIMM23O14925 209 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 MYL12BO14950 172 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 OGG1O15527 345 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 GABRA5P31644 462 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 GP2P55259 537 aaKnown RBP11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 RPS11P62280 158 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 PAX5Q02548 391 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 AESQ08117 197 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 C17orf58Q2M2W7 97 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 CCDC58Q4VC31 144 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 MINOS1Q5TGZ0 78 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 GPR107Q5VW38 600 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 HEPN1Q6WQI6 88 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 Q6ZS46 218 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 FOXRED1Q96CU9 486 aaPredicted RBP11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 MRPL48Q96GC5 212 aaKnown RBP11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 TSC22D3Q99576 134 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 NKX3-1Q99801 234 aaPredicted RBP11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 PPIL3Q9H2H8 161 aaKnown RBP11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 TAS2R4Q9NYW5 299 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 CLEC2DQ9UHP7 191 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 MINOS1-NBL1R4GNA1 71 aa11.25□□□□□ -0.61
PDLIM7-211ENST00000504318 TRAV24A0A0B4J272 114 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 M0QZ24 198 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 CYB5AP00167 134 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 IGFBP3P17936 291 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 GBX2P52951 348 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 LGALS4P56470 323 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 HABP2Q14520 560 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 HERPUD1Q15011 391 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 SSX2Q16385 188 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 PLA1AQ53H76 456 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 PRAMEF5Q5TYX0 476 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 RPL22L1Q6P5R6 122 aaKnown RBP11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 TMEM219Q86XT9 240 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 ANKRD13BQ86YJ7 626 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 CHST4Q8NCG5 386 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 OR5D14Q8NGL3 314 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 HAVCR2Q8TDQ0 301 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 PGLYRP3Q96LB9 341 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 CLEC7AQ9BXN2 247 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 LINC00574Q9H8X3 128 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 RAB18Q9NP72 206 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 TAS2R3Q9NYW6 316 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 DHDHQ9UQ10 334 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 PLXNB1O43157 2135 aa11.24□□□□□ -0.61
PDLIM7-211ENST00000504318 TRBV5-5A0A0J9YX44 114 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 ODAMA1E959 279 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 LY6LH3BQJ8 138 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 ALDOBP05062 364 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 MTNR1BP49286 362 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 BDH1Q02338 343 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 FAM189A2Q15884 450 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 TIMM50Q3ZCQ8 353 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 DMKNQ6E0U4 476 aaPredicted RBP11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 LYPD6Q86Y78 171 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 KLHDC1Q8N7A1 406 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 OR4C13Q8NGP0 309 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 OR13C5Q8NGS8 318 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 ORAI1Q96D31 301 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 SMIM19Q96E16 107 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 MYCBPQ99417 103 aaPredicted RBP11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 FUNDC2Q9BWH2 189 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 WNT10AQ9GZT5 417 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 NCOR1P1Q9H4R4 102 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 ZNF286AQ9HBT8 521 aa11.23□□□□□ -0.61
PDLIM7-211ENST00000504318 ADARB2-AS1A8MUL3 147 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 H3BMQ9 156 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 GABARAPO95166 117 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms