RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 A0A0G2JMP0 313 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 A0A0X1KG70 313 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 TMEM235A6NFC5 223 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 F5H0A9 414 aaPredicted RBP11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 H7C1Q1 480 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 GPR37O15354 613 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 IGHV2-5P01817 119 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 HLA-DQB1P01920 261 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 CSN2P05814 226 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 MELTFP08582 738 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 USF1P22415 310 aaPredicted RBP11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 PTBP1P26599 531 aaKnown RBP eCLIP11.51□□□□□ -0.572e-7■■■■■ 35.2
CYSTM1-202ENST00000504227 PRSS3P35030 304 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 ETV6P41212 452 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 NPY4RP50391 375 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 GNG2P59768 71 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 LMO4P61968 165 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 ZNF45Q02386 682 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 ATXN7L3Q14CW9 347 aaPredicted RBP11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 PYHIN1Q6K0P9 492 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 SNX29P2Q8IUI4 249 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 OR4M2Q8NGB6 313 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 S100ZQ8WXG8 99 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 CMSS1Q9BQ75 279 aaKnown RBP11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 SOSTQ9BQB4 213 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 RIMS4Q9H426 269 aaPredicted RBP11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 CHMP1AQ9HD42 196 aaPredicted RBP11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 ING3Q9NXR8 418 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 CLN8Q9UBY8 286 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 AK3Q9UIJ7 227 aa11.51□□□□□ -0.57
CYSTM1-202ENST00000504227 PDZD2O15018 2839 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 IGHV4-61A0A0C4DH41 118 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 TMEM30CPA0ZSE6 113 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 EDDM3BP56851 147 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 GNB2P62879 340 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 AESQ08117 197 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 EDDM3AQ14507 147 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 ESCO2Q56NI9 601 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 PYDC2Q56P42 97 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 KRBOX4Q5JUW0 171 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 WDR25Q64LD2 544 aaPredicted RBP11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 OLFML2AQ68BL7 652 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 SLC35E4Q6ICL7 350 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 ZNF841Q6ZN19 808 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 ZNF497Q6ZNH5 498 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 RTN4RL2Q86UN3 420 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 PLPPR1Q8TBJ4 325 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 Q96MF0 132 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 ABHD1Q96SE0 405 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 DOCK11Q5JSL3 2073 aa11.5□□□□□ -0.57
CYSTM1-202ENST00000504227 SULT1C2O00338 296 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 MT-ND4P03905 459 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 ERP29P30040 261 aaKnown RBP11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 P2RX3P56373 397 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 MRPS10P82664 201 aaKnown RBP11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 PAX5Q02548 391 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 LSAMPQ13449 338 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 RSBN1Q5VWQ0 802 aaPredicted RBP11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 CD276Q5ZPR3 534 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 KRTAP1-3Q8IUG1 177 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 FCAMRQ8WWV6 532 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 H1FXQ92522 213 aaKnown RBP11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 DYRK2Q92630 601 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 COQ2Q96H96 371 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 SSBP3Q9BWW4 388 aaPredicted RBP11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 REG4Q9BYZ8 158 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 NCOR1P1Q9H4R4 102 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 SCPEP1Q9HB40 452 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 C12orf4Q9NQ89 552 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 KIF25Q9UIL4 384 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 ITGB1BP2Q9UKP3 347 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 ELF5Q9UKW6 265 aaPredicted RBP11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 V9GYH0 126 aa11.49□□□□□ -0.57
CYSTM1-202ENST00000504227 CREBBPQ92793 2442 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 MEIKINA0A087WXM9 373 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 ODAMA1E959 279 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 POM121CA8CG34 1229 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 CTDSPLO15194 276 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 ECDO95905 644 aaPredicted RBP11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 PTHLHP12272 177 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 CBX5P45973 191 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 GLIPR1P48060 266 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 SEC61A1P61619 476 aaKnown RBP11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 RPL31P62899 125 aaKnown RBP11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 MEF2CQ06413 473 aaPredicted RBP11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 C11orf91Q3C1V1 193 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 FGFRL1Q8N441 504 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 NUDCD2Q8WVJ2 157 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 CYYR1Q96J86 154 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 TSC22D3Q99576 134 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 HDHD3Q9BSH5 251 aaPredicted RBP11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 AKIP1Q9NQ31 210 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 TRAPPC2LQ9UL33 140 aa11.48□□□□□ -0.57
CYSTM1-202ENST00000504227 LOC105371242A0A075B767 164 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 TRBV23-1A0A0A0MS06 115 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 hADV38S2A0JD32 116 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 RNF223E7ERA6 249 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 GABARAPH6UMI1 98 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 PHF1O43189 567 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms