RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 NDUFB8O95169 186 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 IGLV3-1P01715 115 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 GLP1RP43220 463 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 NPBWR2P48146 333 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 NUDT2P50583 147 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 RAB40BQ12829 278 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 KLF10Q13118 480 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 TNFAIP8L3Q5GJ75 292 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 KRBOX4Q5JUW0 171 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 IL34Q6ZMJ4 242 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 MINDY2Q8NBR6 621 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 OR8H1Q8NGG4 311 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 OR8D4Q8NGM9 314 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 OTOSQ8NHW6 89 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 COQ2Q96H96 371 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 DHRS1Q96LJ7 313 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 MBOAT4Q96T53 435 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 PBOV1Q9GZY1 135 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 PPIL3Q9H2H8 161 aaKnown RBP9.44□□□□□ -0.9
LSM6-204ENST00000504181 CALYQ9NYX4 217 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 IDI2-AS1Q9NZ38 188 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 KLHDC2Q9Y2U9 406 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 CDH10Q9Y6N8 788 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 TMEM269A0A1B0GVZ9 245 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 ARPC1BO15143 372 aaKnown RBP9.43□□□□□ -0.9
LSM6-204ENST00000504181 SELENOFO60613 162 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 OR2H2O95918 312 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 BCL3P20749 454 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 CD1BP29016 333 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 BLVRBP30043 206 aaPredicted RBP9.43□□□□□ -0.9
LSM6-204ENST00000504181 CDC42P60953 191 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 ATXN7L3Q14CW9 347 aaPredicted RBP9.43□□□□□ -0.9
LSM6-204ENST00000504181 ZNF146Q15072 292 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 SLC15A3Q8IY34 581 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 FAM58AQ8N1B3 248 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 YIPF7Q8N8F6 280 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 TMEM104Q8NE00 496 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 OR9G4Q8NGQ1 327 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 RP9Q8TA86 221 aaKnown RBP9.43□□□□□ -0.9
LSM6-204ENST00000504181 UTP4Q969X6 686 aaKnown RBP9.43□□□□□ -0.9
LSM6-204ENST00000504181 OTULINQ96BN8 352 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 RNF183Q96D59 192 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 C7orf26Q96N11 449 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 EXOSC4Q9NPD3 245 aaKnown RBP9.43□□□□□ -0.9
LSM6-204ENST00000504181 SLC2A8Q9NY64 477 aa9.43□□□□□ -0.9
LSM6-204ENST00000504181 IGHV7-81A0A0B4J1V7 117 aa9.42□□□□□ -0.9
LSM6-204ENST00000504181 RTL8CO15255 209 aa9.42□□□□□ -0.9
LSM6-204ENST00000504181 GADD45GO95257 159 aa9.42□□□□□ -0.9
LSM6-204ENST00000504181 TSPAN31Q12999 210 aa9.42□□□□□ -0.9
LSM6-204ENST00000504181 Q8IYB0 196 aa9.42□□□□□ -0.9
LSM6-204ENST00000504181 GNPDA2Q8TDQ7 276 aa9.42□□□□□ -0.9
LSM6-204ENST00000504181 SPACA5Q96QH8 159 aa9.42□□□□□ -0.9
LSM6-204ENST00000504181 OSBPL10Q9BXB5 764 aa9.42□□□□□ -0.9
LSM6-204ENST00000504181 GSTK1Q9Y2Q3 226 aa9.42□□□□□ -0.9
LSM6-204ENST00000504181 TRBV2A0A0J9YWF9 115 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 SH2D1BO14796 132 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 MRASO14807 208 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 GSTA4O15217 222 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 CSN3P07498 182 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 CGB3P0DN86 165 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 CGB7P0DN87 165 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 SYNJ2BPP57105 145 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 VSNL1P62760 191 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 ZNF45Q02386 682 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 SCN1BQ07699 218 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 MMDQ15546 238 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 SPIN3Q5JUX0 258 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 OR13A1Q8NGR1 328 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 RFESDQ8TAC1 157 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 RTN4IP1Q8WWV3 396 aaPredicted RBP9.41□□□□□ -0.9
LSM6-204ENST00000504181 MS4A10Q96PG2 267 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 KRT84Q9NSB2 600 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 FOXA2Q9Y261 457 aaPredicted RBP9.41□□□□□ -0.9
LSM6-204ENST00000504181 V9GYS6 101 aa9.41□□□□□ -0.9
LSM6-204ENST00000504181 APOBP04114 4563 aaKnown RBP9.4□□□□□ -0.9
LSM6-204ENST00000504181 ACOD1A6NK06 481 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 IL1AP01583 271 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 HLA-DRB1P01911 266 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 TTRP02766 147 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 ZNF44P15621 663 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 ZP3P21754 424 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 HTR1FP30939 366 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 TPPP2P59282 170 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 KLF5Q13887 457 aaPredicted RBP9.4□□□□□ -0.9
LSM6-204ENST00000504181 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
LSM6-204ENST00000504181 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 RPL13AP3Q6NVV1 102 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 WFDC3Q8IUB2 231 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 OR14K1Q8NGZ2 314 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 FAM162AQ96A26 154 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 C7orf34Q96L11 122 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 RHOVQ96L33 236 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 GGTLC1Q9BX51 225 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 TSSK6Q9BXA6 273 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 NKIRAS1Q9NYS0 192 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 SLC23A1Q9UHI7 598 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 ADAM30Q9UKF2 790 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 GTF2A1LQ9UNN4 478 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 MYRFQ9Y2G1 1151 aa9.4□□□□□ -0.9
LSM6-204ENST00000504181 A3GALT2U3KPV4 340 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms